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Cluster: MGYG000001186_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001186_3 MGYG000001186_3_204 219743 221035 - 3.A.1.121.4
TC MGYG000001186_3 MGYG000001186_3_205 221232 221894 + 9.B.143.2.2
TC MGYG000001186_3 MGYG000001186_3_206 221943 224420 - 1.B.52.2.2
STP MGYG000001186_3 MGYG000001186_3_207 224685 226436 + GGDEF
CAZyme MGYG000001186_3 MGYG000001186_3_208 226433 227449 - GH113
CAZyme MGYG000001186_3 MGYG000001186_3_209 227484 228530 - CE2
pfam MGYG000001186_3 MGYG000001186_3_210 228548 230401 - ROK | PMI_typeI_cat | MPI_cupin_dom
CAZyme MGYG000001186_3 MGYG000001186_3_211 230423 231499 - CBM35inCE17 | CE17
Gene ID: MGYG000001186_3_204
Type: TC
Location: 219743 - 221035 (-)
Gene ID: MGYG000001186_3_205
Type: TC
Location: 221232 - 221894 (+)
Gene ID: MGYG000001186_3_206
Type: TC
Location: 221943 - 224420 (-)
Gene ID: MGYG000001186_3_207
Type: STP
Location: 224685 - 226436 (+)
Gene ID: MGYG000001186_3_208
Type: CAZyme
Location: 226433 - 227449 (-)
Gene ID: MGYG000001186_3_209
Type: CAZyme
Location: 227484 - 228530 (-)
Gene ID: MGYG000001186_3_210
Type: pfam
Location: 228548 - 230401 (-)
Gene ID: MGYG000001186_3_211
Type: CAZyme
Location: 230423 - 231499 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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