Cluster: MGYG000001186_CGC14
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000001186
- CGC Family ID: CGCFAM_03058
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001186_2 | MGYG000001186_2_194 | 232712 | 234220 | - | GH51_1 |
| TC | MGYG000001186_2 | MGYG000001186_2_195 | 234233 | 235078 | - | 3.A.1.1.34 |
| TC | MGYG000001186_2 | MGYG000001186_2_196 | 235083 | 235967 | - | 3.A.1.1.20 |
| TC | MGYG000001186_2 | MGYG000001186_2_197 | 236023 | 237321 | - | 3.A.1.1.3 |
| CAZyme | MGYG000001186_2 | MGYG000001186_2_198 | 237894 | 240158 | - | GH3 |
| CAZyme | MGYG000001186_2 | MGYG000001186_2_199 | 240186 | 242540 | - | GH31_3 |
| TC | MGYG000001186_2 | MGYG000001186_2_200 | 242903 | 244774 | + | 8.A.59.2.1 |
| TF | MGYG000001186_2 | MGYG000001186_2_201 | 244789 | 246330 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | MGYG000001186_2 | MGYG000001186_2_202 | 246379 | 248178 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001186_2 | MGYG000001186_2_203 | 248202 | 249113 | - | 3.A.1.1.29 |
| TC | MGYG000001186_2 | MGYG000001186_2_204 | 249127 | 250059 | - | 3.A.1.1.10 |
| CAZyme | MGYG000001186_2 | MGYG000001186_2_205 | 250222 | 252486 | - | GH95 |
Gene ID: MGYG000001186_2_194
Type: CAZyme
Location: 232712 - 234220 (-)
Type: CAZyme
Location: 232712 - 234220 (-)
Gene ID: MGYG000001186_2_195
Type: TC
Location: 234233 - 235078 (-)
Type: TC
Location: 234233 - 235078 (-)
Gene ID: MGYG000001186_2_196
Type: TC
Location: 235083 - 235967 (-)
Type: TC
Location: 235083 - 235967 (-)
Gene ID: MGYG000001186_2_197
Type: TC
Location: 236023 - 237321 (-)
Type: TC
Location: 236023 - 237321 (-)
Gene ID: MGYG000001186_2_198
Type: CAZyme
Location: 237894 - 240158 (-)
Type: CAZyme
Location: 237894 - 240158 (-)
Gene ID: MGYG000001186_2_199
Type: CAZyme
Location: 240186 - 242540 (-)
Type: CAZyme
Location: 240186 - 242540 (-)
Gene ID: MGYG000001186_2_200
Type: TC
Location: 242903 - 244774 (+)
Type: TC
Location: 242903 - 244774 (+)
Gene ID: MGYG000001186_2_201
Type: TF
Location: 244789 - 246330 (+)
Type: TF
Location: 244789 - 246330 (+)
Gene ID: MGYG000001186_2_202
Type:
Location: 246379 - 248178 (-)
Type:
Location: 246379 - 248178 (-)
Gene ID: MGYG000001186_2_203
Type: TC
Location: 248202 - 249113 (-)
Type: TC
Location: 248202 - 249113 (-)
Gene ID: MGYG000001186_2_204
Type: TC
Location: 249127 - 250059 (-)
Type: TC
Location: 249127 - 250059 (-)
Gene ID: MGYG000001186_2_205
Type: CAZyme
Location: 250222 - 252486 (-)
Type: CAZyme
Location: 250222 - 252486 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp905209075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.