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Cluster: MGYG000001180_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001180_42 MGYG000001180_42_249 283405 284376 - 1.A.34.1.3
CAZyme MGYG000001180_42 MGYG000001180_42_250 284427 286064 - CE12 | CE12
CAZyme MGYG000001180_42 MGYG000001180_42_251 286197 288635 + GH2
pfam MGYG000001180_42 MGYG000001180_42_252 288667 291294 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2
CAZyme MGYG000001180_42 MGYG000001180_42_253 291309 292574 + CE15
Gene ID: MGYG000001180_42_249
Type: TC
Location: 283405 - 284376 (-)
Gene ID: MGYG000001180_42_250
Type: CAZyme
Location: 284427 - 286064 (-)
Gene ID: MGYG000001180_42_251
Type: CAZyme
Location: 286197 - 288635 (+)
Gene ID: MGYG000001180_42_252
Type: pfam
Location: 288667 - 291294 (+)
Gene ID: MGYG000001180_42_253
Type: CAZyme
Location: 291309 - 292574 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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