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Cluster: MGYG000001180_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001180_19 MGYG000001180_19_60 51078 52190 + 3.A.1.132.3
TC MGYG000001180_19 MGYG000001180_19_61 52187 53185 - 2.A.19.5.2
pfam MGYG000001180_19 MGYG000001180_19_62 53258 54439 - DUF4421
peptidase MGYG000001180_19 MGYG000001180_19_63 54540 55601 - C59.UPW
TC MGYG000001180_19 MGYG000001180_19_64 55826 57646 + 2.A.58.2.2
STP MGYG000001180_19 MGYG000001180_19_65 57866 58300 + Response_reg
pfam MGYG000001180_19 MGYG000001180_19_66 58297 58908 + RNase_HII
CAZyme MGYG000001180_19 MGYG000001180_19_67 58912 60348 - GH13
CAZyme MGYG000001180_19 MGYG000001180_19_68 60457 62862 + GH31
Gene ID: MGYG000001180_19_60
Type: TC
Location: 51078 - 52190 (+)
Gene ID: MGYG000001180_19_61
Type: TC
Location: 52187 - 53185 (-)
Gene ID: MGYG000001180_19_62
Type: pfam
Location: 53258 - 54439 (-)
Gene ID: MGYG000001180_19_63
Type: peptidase
Location: 54540 - 55601 (-)
Gene ID: MGYG000001180_19_64
Type: TC
Location: 55826 - 57646 (+)
Gene ID: MGYG000001180_19_65
Type: STP
Location: 57866 - 58300 (+)
Gene ID: MGYG000001180_19_66
Type: pfam
Location: 58297 - 58908 (+)
Gene ID: MGYG000001180_19_67
Type: CAZyme
Location: 58912 - 60348 (-)
Gene ID: MGYG000001180_19_68
Type: CAZyme
Location: 60457 - 62862 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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