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Cluster: MGYG000001179_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001179_60 MGYG000001179_60_19 15626 16744 - 9.B.183.1.8
CAZyme MGYG000001179_60 MGYG000001179_60_20 16741 17868 - GT4
pfam MGYG000001179_60 MGYG000001179_60_21 17868 19052 - Epimerase_2
pfam MGYG000001179_60 MGYG000001179_60_22 19057 20274 - Epimerase | Polysacc_synt_C
TC MGYG000001179_60 MGYG000001179_60_23 20276 21334 - 9.B.18.2.1
CAZyme MGYG000001179_60 MGYG000001179_60_24 21327 22529 - GT4
pfam MGYG000001179_60 MGYG000001179_60_25 22534 23508 - ATP-grasp_3 | ATPgrasp_Ter | PylC-like_N
TC MGYG000001179_60 MGYG000001179_60_26 23501 24166 - 9.B.18.1.2
STP MGYG000001179_60 MGYG000001179_60_27 24159 25412 - Aminotran_1_2
TC MGYG000001179_60 MGYG000001179_60_28 25428 27308 - 9.B.18.2.1
Gene ID: MGYG000001179_60_19
Type: TC
Location: 15626 - 16744 (-)
Gene ID: MGYG000001179_60_20
Type: CAZyme
Location: 16741 - 17868 (-)
Gene ID: MGYG000001179_60_21
Type: pfam
Location: 17868 - 19052 (-)
Gene ID: MGYG000001179_60_22
Type: pfam
Location: 19057 - 20274 (-)
Gene ID: MGYG000001179_60_23
Type: TC
Location: 20276 - 21334 (-)
Gene ID: MGYG000001179_60_24
Type: CAZyme
Location: 21327 - 22529 (-)
Gene ID: MGYG000001179_60_25
Type: pfam
Location: 22534 - 23508 (-)
Gene ID: MGYG000001179_60_26
Type: TC
Location: 23501 - 24166 (-)
Gene ID: MGYG000001179_60_27
Type: STP
Location: 24159 - 25412 (-)
Gene ID: MGYG000001179_60_28
Type: TC
Location: 25428 - 27308 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001179_60_22 vegetarian > omnivore 1.34102 0.03181

🧭 Explore Read Mapping of CGC

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