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Cluster: MGYG000001179_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001179_39 MGYG000001179_39_23 28320 29489 - CE9
STP MGYG000001179_39 MGYG000001179_39_24 29605 30771 - SIS | SIS
TF MGYG000001179_39 MGYG000001179_39_25 30883 31617 - GntR
TC MGYG000001179_39 MGYG000001179_39_26 32268 32750 - 4.A.6.1.5
pfam MGYG000001179_39 MGYG000001179_39_27 33193 33666 - DUF386
CAZyme MGYG000001179_39 MGYG000001179_39_28 33699 34868 - CE9
TF MGYG000001179_39 MGYG000001179_39_29 35012 35743 - GntR
TC MGYG000001179_39 MGYG000001179_39_30 35976 37463 - 4.A.1.1.7
Gene ID: MGYG000001179_39_23
Type: CAZyme
Location: 28320 - 29489 (-)
Gene ID: MGYG000001179_39_24
Type: STP
Location: 29605 - 30771 (-)
Gene ID: MGYG000001179_39_25
Type: TF
Location: 30883 - 31617 (-)
Gene ID: MGYG000001179_39_26
Type: TC
Location: 32268 - 32750 (-)
Gene ID: MGYG000001179_39_27
Type: pfam
Location: 33193 - 33666 (-)
Gene ID: MGYG000001179_39_28
Type: CAZyme
Location: 33699 - 34868 (-)
Gene ID: MGYG000001179_39_29
Type: TF
Location: 35012 - 35743 (-)
Gene ID: MGYG000001179_39_30
Type: TC
Location: 35976 - 37463 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001179_39_29 vegetarian > vegan 3.10291 0.02258

🧭 Explore Read Mapping of CGC

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