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Cluster: MGYG000001176_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001176_20 MGYG000001176_20_12 14438 15634 - 2.A.1.2.18
NULL(UNKNOWN) MGYG000001176_20 MGYG000001176_20_13 15808 16560 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000001176_20 MGYG000001176_20_14 16725 18098 - GH4
TF MGYG000001176_20 MGYG000001176_20_15 18273 19025 + HTH_6
TC MGYG000001176_20 MGYG000001176_20_16 19088 20752 - 4.A.1.1.3
TC MGYG000001176_20 MGYG000001176_20_17 21067 23427 - 9.A.8.1.6
peptidase MGYG000001176_20 MGYG000001176_20_18 23957 24856 - S09.UPW
TC MGYG000001176_20 MGYG000001176_20_19 25104 25667 + 4.A.1.2.6
pfam MGYG000001176_20 MGYG000001176_20_20 25847 27250 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) MGYG000001176_20 MGYG000001176_20_21 27501 28289 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000001176_20 MGYG000001176_20_22 28448 29428 + 3.A.1.34.1
TC MGYG000001176_20 MGYG000001176_20_23 29632 30555 + 3.A.1.34.1
TC MGYG000001176_20 MGYG000001176_20_24 30548 31342 + 3.A.1.34.1
TC MGYG000001176_20 MGYG000001176_20_25 31677 32444 + 1.A.23.4.2
Gene ID: MGYG000001176_20_12
Type: TC
Location: 14438 - 15634 (-)
Gene ID: MGYG000001176_20_13
Type:
Location: 15808 - 16560 (-)
Gene ID: MGYG000001176_20_14
Type: CAZyme
Location: 16725 - 18098 (-)
Gene ID: MGYG000001176_20_15
Type: TF
Location: 18273 - 19025 (+)
Gene ID: MGYG000001176_20_16
Type: TC
Location: 19088 - 20752 (-)
Gene ID: MGYG000001176_20_17
Type: TC
Location: 21067 - 23427 (-)
Gene ID: MGYG000001176_20_18
Type: peptidase
Location: 23957 - 24856 (-)
Gene ID: MGYG000001176_20_19
Type: TC
Location: 25104 - 25667 (+)
Gene ID: MGYG000001176_20_20
Type: pfam
Location: 25847 - 27250 (+)
Gene ID: MGYG000001176_20_21
Type:
Location: 27501 - 28289 (+)
Gene ID: MGYG000001176_20_22
Type: TC
Location: 28448 - 29428 (+)
Gene ID: MGYG000001176_20_23
Type: TC
Location: 29632 - 30555 (+)
Gene ID: MGYG000001176_20_24
Type: TC
Location: 30548 - 31342 (+)
Gene ID: MGYG000001176_20_25
Type: TC
Location: 31677 - 32444 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001176_20_13 vegan > omnivore 1.88627 0.00863
MGYG000001176_20_14 vegan > omnivore 1.66592 0.00863
MGYG000001176_20_16 vegan > omnivore 1.11370 0.00863

🧭 Explore Read Mapping of CGC

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