Cluster: MGYG000001176_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001176
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001176_49 | MGYG000001176_49_6 | 5028 | 5366 | - | 4.A.3.1.2 |
| TF | MGYG000001176_49 | MGYG000001176_49_7 | 5581 | 6585 | - | LacI |
| TC | MGYG000001176_49 | MGYG000001176_49_8 | 6943 | 8718 | + | 4.A.3.1.1 |
| CAZyme | MGYG000001176_49 | MGYG000001176_49_9 | 8785 | 10224 | + | GH1 |
| TF | MGYG000001176_49 | MGYG000001176_49_10 | 10583 | 11593 | - | LacI |
| TC | MGYG000001176_49 | MGYG000001176_49_11 | 11869 | 13647 | + | 4.A.3.1.1 |
| CAZyme | MGYG000001176_49 | MGYG000001176_49_12 | 13723 | 15144 | + | GH1 |
Gene ID: MGYG000001176_49_6
Type: TC
Location: 5028 - 5366 (-)
Type: TC
Location: 5028 - 5366 (-)
Gene ID: MGYG000001176_49_7
Type: TF
Location: 5581 - 6585 (-)
Type: TF
Location: 5581 - 6585 (-)
Gene ID: MGYG000001176_49_8
Type: TC
Location: 6943 - 8718 (+)
Type: TC
Location: 6943 - 8718 (+)
Gene ID: MGYG000001176_49_9
Type: CAZyme
Location: 8785 - 10224 (+)
Type: CAZyme
Location: 8785 - 10224 (+)
Gene ID: MGYG000001176_49_10
Type: TF
Location: 10583 - 11593 (-)
Type: TF
Location: 10583 - 11593 (-)
Gene ID: MGYG000001176_49_11
Type: TC
Location: 11869 - 13647 (+)
Type: TC
Location: 11869 - 13647 (+)
Gene ID: MGYG000001176_49_12
Type: CAZyme
Location: 13723 - 15144 (+)
Type: CAZyme
Location: 13723 - 15144 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp002391315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.