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Cluster: MGYG000001176_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001176_45 MGYG000001176_45_17 17327 18211 - CE7
TC MGYG000001176_45 MGYG000001176_45_18 18385 19212 - 3.A.1.5.27
TC MGYG000001176_45 MGYG000001176_45_19 19213 21228 - 3.A.1.5.25
TC MGYG000001176_45 MGYG000001176_45_20 21232 22188 - 3.A.1.5.38
TC MGYG000001176_45 MGYG000001176_45_21 22346 23953 - 3.A.1.5.27
pfam MGYG000001176_45 MGYG000001176_45_22 24318 26258 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC MGYG000001176_45 MGYG000001176_45_23 26265 28562 - 2.A.66.4.4
pfam MGYG000001176_45 MGYG000001176_45_24 28566 29066 - tRNA_edit
pfam MGYG000001176_45 MGYG000001176_45_25 29201 32080 - UvrA_DNA-bind | UvrA_inter
TC MGYG000001176_45 MGYG000001176_45_26 32341 33171 + 3.A.1.132.3
Gene ID: MGYG000001176_45_17
Type: CAZyme
Location: 17327 - 18211 (-)
Gene ID: MGYG000001176_45_18
Type: TC
Location: 18385 - 19212 (-)
Gene ID: MGYG000001176_45_19
Type: TC
Location: 19213 - 21228 (-)
Gene ID: MGYG000001176_45_20
Type: TC
Location: 21232 - 22188 (-)
Gene ID: MGYG000001176_45_21
Type: TC
Location: 22346 - 23953 (-)
Gene ID: MGYG000001176_45_22
Type: pfam
Location: 24318 - 26258 (-)
Gene ID: MGYG000001176_45_23
Type: TC
Location: 26265 - 28562 (-)
Gene ID: MGYG000001176_45_24
Type: pfam
Location: 28566 - 29066 (-)
Gene ID: MGYG000001176_45_25
Type: pfam
Location: 29201 - 32080 (-)
Gene ID: MGYG000001176_45_26
Type: TC
Location: 32341 - 33171 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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