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Cluster: MGYG000001176_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001176_6 MGYG000001176_6_48 53444 53887 + 4.A.6.1.16
pfam MGYG000001176_6 MGYG000001176_6_49 53887 54168 + YajC
TC MGYG000001176_6 MGYG000001176_6_50 54205 54687 + 4.A.6.1.4
TC MGYG000001176_6 MGYG000001176_6_51 54778 55578 + 4.A.6.1.4
TC MGYG000001176_6 MGYG000001176_6_52 55568 56650 + 4.A.6.1.4
TF MGYG000001176_6 MGYG000001176_6_53 56835 57566 + GntR
STP MGYG000001176_6 MGYG000001176_6_54 57681 58847 + SIS | SIS
CAZyme MGYG000001176_6 MGYG000001176_6_55 58965 60134 + CE9
Gene ID: MGYG000001176_6_48
Type: TC
Location: 53444 - 53887 (+)
Gene ID: MGYG000001176_6_49
Type: pfam
Location: 53887 - 54168 (+)
Gene ID: MGYG000001176_6_50
Type: TC
Location: 54205 - 54687 (+)
Gene ID: MGYG000001176_6_51
Type: TC
Location: 54778 - 55578 (+)
Gene ID: MGYG000001176_6_52
Type: TC
Location: 55568 - 56650 (+)
Gene ID: MGYG000001176_6_53
Type: TF
Location: 56835 - 57566 (+)
Gene ID: MGYG000001176_6_54
Type: STP
Location: 57681 - 58847 (+)
Gene ID: MGYG000001176_6_55
Type: CAZyme
Location: 58965 - 60134 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001176_6_49 vegan > omnivore 1.08640 0.00863

🧭 Explore Read Mapping of CGC

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