Cluster: MGYG000001173_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001173
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001173_4 | MGYG000001173_4_43 | 56582 | 58018 | - | GH32 |
| pfam | MGYG000001173_4 | MGYG000001173_4_44 | 58048 | 58452 | - | EIIA-man |
| TC | MGYG000001173_4 | MGYG000001173_4_45 | 58486 | 59346 | - | 4.A.6.1.13 |
| TC | MGYG000001173_4 | MGYG000001173_4_46 | 59339 | 60112 | - | 4.A.6.1.13 |
| TC | MGYG000001173_4 | MGYG000001173_4_47 | 60128 | 60616 | - | 4.A.6.1.16 |
Gene ID: MGYG000001173_4_43
Type: CAZyme
Location: 56582 - 58018 (-)
Type: CAZyme
Location: 56582 - 58018 (-)
Gene ID: MGYG000001173_4_44
Type: pfam
Location: 58048 - 58452 (-)
Type: pfam
Location: 58048 - 58452 (-)
Gene ID: MGYG000001173_4_45
Type: TC
Location: 58486 - 59346 (-)
Type: TC
Location: 58486 - 59346 (-)
Gene ID: MGYG000001173_4_46
Type: TC
Location: 59339 - 60112 (-)
Type: TC
Location: 59339 - 60112 (-)
Gene ID: MGYG000001173_4_47
Type: TC
Location: 60128 - 60616 (-)
Type: TC
Location: 60128 - 60616 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900759335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001173_4_47 | vegetarian > omnivore | 1.60903 | 0.02476 |