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Cluster: MGYG000001173_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001173_98 MGYG000001173_98_18 17297 18748 - 2.A.66.2.23
pfam MGYG000001173_98 MGYG000001173_98_19 18807 19859 - Acyl_transf_3
pfam MGYG000001173_98 MGYG000001173_98_20 19916 20824 - ATPgrasp_TupA
CAZyme MGYG000001173_98 MGYG000001173_98_21 20860 21924 - GT4
NULL(UNKNOWN) MGYG000001173_98 MGYG000001173_98_22 21921 23129 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000001173_98 MGYG000001173_98_23 23936 25012 - GT4
pfam MGYG000001173_98 MGYG000001173_98_24 25009 25485 - Hexapep | Hexapep_2
pfam MGYG000001173_98 MGYG000001173_98_25 25445 26548 - Epimerase_2
CAZyme MGYG000001173_98 MGYG000001173_98_26 26541 27335 - GT26
Gene ID: MGYG000001173_98_18
Type: TC
Location: 17297 - 18748 (-)
Gene ID: MGYG000001173_98_19
Type: pfam
Location: 18807 - 19859 (-)
Gene ID: MGYG000001173_98_20
Type: pfam
Location: 19916 - 20824 (-)
Gene ID: MGYG000001173_98_21
Type: CAZyme
Location: 20860 - 21924 (-)
Gene ID: MGYG000001173_98_22
Type:
Location: 21921 - 23129 (-)
Gene ID: MGYG000001173_98_23
Type: CAZyme
Location: 23936 - 25012 (-)
Gene ID: MGYG000001173_98_24
Type: pfam
Location: 25009 - 25485 (-)
Gene ID: MGYG000001173_98_25
Type: pfam
Location: 25445 - 26548 (-)
Gene ID: MGYG000001173_98_26
Type: CAZyme
Location: 26541 - 27335 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001173_98_25 vegan > omnivore 1.77689 0.03844
MGYG000001173_98_25 vegetarian > omnivore 1.23571 0.02476

🧭 Explore Read Mapping of CGC

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