Cluster: MGYG000001173_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001173
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001173_80 | MGYG000001173_80_29 | 40179 | 40433 | + | 3.A.1.3.16 |
| NULL(UNKNOWN) | MGYG000001173_80 | MGYG000001173_80_30 | 40556 | 41965 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000001173_80 | MGYG000001173_80_31 | 41965 | 43101 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001173_80 | MGYG000001173_80_32 | 43165 | 44229 | - | GT2 |
| NULL(UNKNOWN) | MGYG000001173_80 | MGYG000001173_80_33 | 44226 | 44558 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001173_80 | MGYG000001173_80_34 | 44558 | 45310 | - | GT32 |
Gene ID: MGYG000001173_80_29
Type: TC
Location: 40179 - 40433 (+)
Type: TC
Location: 40179 - 40433 (+)
Gene ID: MGYG000001173_80_30
Type:
Location: 40556 - 41965 (-)
Type:
Location: 40556 - 41965 (-)
Gene ID: MGYG000001173_80_31
Type:
Location: 41965 - 43101 (-)
Type:
Location: 41965 - 43101 (-)
Gene ID: MGYG000001173_80_32
Type: CAZyme
Location: 43165 - 44229 (-)
Type: CAZyme
Location: 43165 - 44229 (-)
Gene ID: MGYG000001173_80_33
Type:
Location: 44226 - 44558 (-)
Type:
Location: 44226 - 44558 (-)
Gene ID: MGYG000001173_80_34
Type: CAZyme
Location: 44558 - 45310 (-)
Type: CAZyme
Location: 44558 - 45310 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900759335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001173_80_29 | vegan > omnivore | 1.00097 | 0.03844 |