Cluster: MGYG000001157_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001157
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001157_46 | MGYG000001157_46_13 | 13810 | 14862 | - | GT4 |
| CAZyme | MGYG000001157_46 | MGYG000001157_46_14 | 14923 | 16065 | - | GH3 |
| pfam | MGYG000001157_46 | MGYG000001157_46_15 | 16291 | 17307 | - | DUF4340 | DUF4340 |
| pfam | MGYG000001157_46 | MGYG000001157_46_16 | 17317 | 18741 | - | ABC_transp_aux |
| TC | MGYG000001157_46 | MGYG000001157_46_17 | 18757 | 19620 | - | 3.A.1.132.1 |
| TC | MGYG000001157_46 | MGYG000001157_46_18 | 19604 | 20617 | - | 3.A.1.132.4 |
Gene ID: MGYG000001157_46_13
Type: CAZyme
Location: 13810 - 14862 (-)
Type: CAZyme
Location: 13810 - 14862 (-)
Gene ID: MGYG000001157_46_14
Type: CAZyme
Location: 14923 - 16065 (-)
Type: CAZyme
Location: 14923 - 16065 (-)
Gene ID: MGYG000001157_46_15
Type: pfam
Location: 16291 - 17307 (-)
Type: pfam
Location: 16291 - 17307 (-)
Gene ID: MGYG000001157_46_16
Type: pfam
Location: 17317 - 18741 (-)
Type: pfam
Location: 17317 - 18741 (-)
Gene ID: MGYG000001157_46_17
Type: TC
Location: 18757 - 19620 (-)
Type: TC
Location: 18757 - 19620 (-)
Gene ID: MGYG000001157_46_18
Type: TC
Location: 19604 - 20617 (-)
Type: TC
Location: 19604 - 20617 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900540775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.