Cluster: MGYG000001157_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: MGYG000001157
- CGC Family ID: CGCFAM_00078
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001157_41 | MGYG000001157_41_11 | 13664 | 15925 | + | GT35 |
| TC | MGYG000001157_41 | MGYG000001157_41_12 | 16633 | 18399 | - | 1.C.39.4.6 |
| NULL(UNKNOWN) | MGYG000001157_41 | MGYG000001157_41_13 | 18479 | 18628 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001157_41 | MGYG000001157_41_14 | 19257 | 20642 | - | 2.A.2.3.2 |
| CAZyme | MGYG000001157_41 | MGYG000001157_41_15 | 20672 | 23743 | - | GH2 |
Gene ID: MGYG000001157_41_11
Type: CAZyme
Location: 13664 - 15925 (+)
Type: CAZyme
Location: 13664 - 15925 (+)
Gene ID: MGYG000001157_41_12
Type: TC
Location: 16633 - 18399 (-)
Type: TC
Location: 16633 - 18399 (-)
Gene ID: MGYG000001157_41_13
Type:
Location: 18479 - 18628 (-)
Type:
Location: 18479 - 18628 (-)
Gene ID: MGYG000001157_41_14
Type: TC
Location: 19257 - 20642 (-)
Type: TC
Location: 19257 - 20642 (-)
Gene ID: MGYG000001157_41_15
Type: CAZyme
Location: 20672 - 23743 (-)
Type: CAZyme
Location: 20672 - 23743 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900540775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001157_41_15 | vegan > omnivore | 1.15736 | 0.01560 |