Cluster: MGYG000001157_CGC35
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000001157
- CGC Family ID: CGCFAM_00055
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001157_117 | MGYG000001157_117_5 | 5999 | 6832 | - | GT6 |
| TC | MGYG000001157_117 | MGYG000001157_117_6 | 6829 | 8109 | - | 3.A.1.103.5 |
| TC | MGYG000001157_117 | MGYG000001157_117_7 | 8122 | 8982 | - | 3.A.1.103.5 |
| CAZyme | MGYG000001157_117 | MGYG000001157_117_8 | 8997 | 10997 | - | GT2 | GT2 |
| CAZyme | MGYG000001157_117 | MGYG000001157_117_9 | 11014 | 11994 | - | GT2 |
| pfam | MGYG000001157_117 | MGYG000001157_117_10 | 11994 | 13097 | - | ATPgrasp_TupA |
| CAZyme | MGYG000001157_117 | MGYG000001157_117_11 | 13101 | 14162 | - | GT2 |
Gene ID: MGYG000001157_117_5
Type: CAZyme
Location: 5999 - 6832 (-)
Type: CAZyme
Location: 5999 - 6832 (-)
Gene ID: MGYG000001157_117_6
Type: TC
Location: 6829 - 8109 (-)
Type: TC
Location: 6829 - 8109 (-)
Gene ID: MGYG000001157_117_7
Type: TC
Location: 8122 - 8982 (-)
Type: TC
Location: 8122 - 8982 (-)
Gene ID: MGYG000001157_117_8
Type: CAZyme
Location: 8997 - 10997 (-)
Type: CAZyme
Location: 8997 - 10997 (-)
Gene ID: MGYG000001157_117_9
Type: CAZyme
Location: 11014 - 11994 (-)
Type: CAZyme
Location: 11014 - 11994 (-)
Gene ID: MGYG000001157_117_10
Type: pfam
Location: 11994 - 13097 (-)
Type: pfam
Location: 11994 - 13097 (-)
Gene ID: MGYG000001157_117_11
Type: CAZyme
Location: 13101 - 14162 (-)
Type: CAZyme
Location: 13101 - 14162 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900540775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001157_117_5 | vegetarian > omnivore | 1.63084 | 0.01141 |