Cluster: MGYG000001157_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001157
- CGC Family ID: CGCFAM_00113
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001157_108 | MGYG000001157_108_24 | 22801 | 23820 | + | GT2 |
| pfam | MGYG000001157_108 | MGYG000001157_108_25 | 23832 | 24485 | + | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| TF | MGYG000001157_108 | MGYG000001157_108_26 | 24522 | 25406 | - | MerR |
| TC | MGYG000001157_108 | MGYG000001157_108_27 | 25487 | 27127 | - | 3.A.1.135.6 |
| TC | MGYG000001157_108 | MGYG000001157_108_28 | 27111 | 28853 | - | 3.A.1.210.11 |
Gene ID: MGYG000001157_108_24
Type: CAZyme
Location: 22801 - 23820 (+)
Type: CAZyme
Location: 22801 - 23820 (+)
Gene ID: MGYG000001157_108_25
Type: pfam
Location: 23832 - 24485 (+)
Type: pfam
Location: 23832 - 24485 (+)
Gene ID: MGYG000001157_108_26
Type: TF
Location: 24522 - 25406 (-)
Type: TF
Location: 24522 - 25406 (-)
Gene ID: MGYG000001157_108_27
Type: TC
Location: 25487 - 27127 (-)
Type: TC
Location: 25487 - 27127 (-)
Gene ID: MGYG000001157_108_28
Type: TC
Location: 27111 - 28853 (-)
Type: TC
Location: 27111 - 28853 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900540775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.