Cluster: MGYG000001157_CGC25
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001157
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001157_89 | MGYG000001157_89_1 | 3 | 1025 | - | 2.A.79.1.3 |
| pfam | MGYG000001157_89 | MGYG000001157_89_2 | 1006 | 1560 | - | Phage_integrase |
| pfam | MGYG000001157_89 | MGYG000001157_89_3 | 1958 | 2503 | - | GtrA_DPMS_TM |
| CAZyme | MGYG000001157_89 | MGYG000001157_89_4 | 2517 | 4937 | - | GH3 |
| pfam | MGYG000001157_89 | MGYG000001157_89_5 | 5036 | 6652 | - | Big_3 |
| CAZyme | MGYG000001157_89 | MGYG000001157_89_6 | 6668 | 9634 | - | GH3 |
| pfam | MGYG000001157_89 | MGYG000001157_89_7 | 9853 | 11130 | - | HATPase_c_5 |
| TF | MGYG000001157_89 | MGYG000001157_89_8 | 11118 | 11876 | - | LytTR |
| TC | MGYG000001157_89 | MGYG000001157_89_9 | 12437 | 13537 | + | 2.A.38.4.1 |
| TC | MGYG000001157_89 | MGYG000001157_89_10 | 13554 | 14201 | + | 2.A.38.4.4 |
| TC | MGYG000001157_89 | MGYG000001157_89_11 | 14412 | 15515 | + | 2.A.21.9.2 |
Gene ID: MGYG000001157_89_1
Type: TC
Location: 3 - 1025 (-)
Type: TC
Location: 3 - 1025 (-)
Gene ID: MGYG000001157_89_2
Type: pfam
Location: 1006 - 1560 (-)
Type: pfam
Location: 1006 - 1560 (-)
Gene ID: MGYG000001157_89_3
Type: pfam
Location: 1958 - 2503 (-)
Type: pfam
Location: 1958 - 2503 (-)
Gene ID: MGYG000001157_89_4
Type: CAZyme
Location: 2517 - 4937 (-)
Type: CAZyme
Location: 2517 - 4937 (-)
Gene ID: MGYG000001157_89_5
Type: pfam
Location: 5036 - 6652 (-)
Type: pfam
Location: 5036 - 6652 (-)
Gene ID: MGYG000001157_89_6
Type: CAZyme
Location: 6668 - 9634 (-)
Type: CAZyme
Location: 6668 - 9634 (-)
Gene ID: MGYG000001157_89_7
Type: pfam
Location: 9853 - 11130 (-)
Type: pfam
Location: 9853 - 11130 (-)
Gene ID: MGYG000001157_89_8
Type: TF
Location: 11118 - 11876 (-)
Type: TF
Location: 11118 - 11876 (-)
Gene ID: MGYG000001157_89_9
Type: TC
Location: 12437 - 13537 (+)
Type: TC
Location: 12437 - 13537 (+)
Gene ID: MGYG000001157_89_10
Type: TC
Location: 13554 - 14201 (+)
Type: TC
Location: 13554 - 14201 (+)
Gene ID: MGYG000001157_89_11
Type: TC
Location: 14412 - 15515 (+)
Type: TC
Location: 14412 - 15515 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900540775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.