Cluster: MGYG000001157_CGC2
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000001157
- CGC Family ID: CGCFAM_00122
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001157_21 | MGYG000001157_21_1 | 76 | 2838 | - | GH2 |
| CAZyme | MGYG000001157_21 | MGYG000001157_21_2 | 2853 | 4601 | - | GH2 |
| CAZyme | MGYG000001157_21 | MGYG000001157_21_3 | 4695 | 6407 | - | GH154 |
| CAZyme | MGYG000001157_21 | MGYG000001157_21_4 | 6449 | 7612 | - | GH88 |
| TC | MGYG000001157_21 | MGYG000001157_21_5 | 7832 | 8695 | - | 3.A.1.1.36 |
| TC | MGYG000001157_21 | MGYG000001157_21_6 | 8713 | 9630 | - | 3.A.1.1.20 |
| STP | MGYG000001157_21 | MGYG000001157_21_7 | 9769 | 11106 | - | SBP_bac_1 |
| TC | MGYG000001157_21 | MGYG000001157_21_8 | 11462 | 13297 | + | 8.A.59.2.1 |
| TF | MGYG000001157_21 | MGYG000001157_21_9 | 13389 | 14672 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000001157_21 | MGYG000001157_21_10 | 14647 | 16461 | + | PL33_1 |
| NULL(UNKNOWN) | MGYG000001157_21 | MGYG000001157_21_11 | 16475 | 17269 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000001157_21 | MGYG000001157_21_12 | 17396 | 19834 | - | Big_4 |
| CAZyme | MGYG000001157_21 | MGYG000001157_21_13 | 19789 | 22533 | - | GH59 |
Gene ID: MGYG000001157_21_1
Type: CAZyme
Location: 76 - 2838 (-)
Type: CAZyme
Location: 76 - 2838 (-)
Gene ID: MGYG000001157_21_2
Type: CAZyme
Location: 2853 - 4601 (-)
Type: CAZyme
Location: 2853 - 4601 (-)
Gene ID: MGYG000001157_21_3
Type: CAZyme
Location: 4695 - 6407 (-)
Type: CAZyme
Location: 4695 - 6407 (-)
Gene ID: MGYG000001157_21_4
Type: CAZyme
Location: 6449 - 7612 (-)
Type: CAZyme
Location: 6449 - 7612 (-)
Gene ID: MGYG000001157_21_5
Type: TC
Location: 7832 - 8695 (-)
Type: TC
Location: 7832 - 8695 (-)
Gene ID: MGYG000001157_21_6
Type: TC
Location: 8713 - 9630 (-)
Type: TC
Location: 8713 - 9630 (-)
Gene ID: MGYG000001157_21_7
Type: STP
Location: 9769 - 11106 (-)
Type: STP
Location: 9769 - 11106 (-)
Gene ID: MGYG000001157_21_8
Type: TC
Location: 11462 - 13297 (+)
Type: TC
Location: 11462 - 13297 (+)
Gene ID: MGYG000001157_21_9
Type: TF
Location: 13389 - 14672 (+)
Type: TF
Location: 13389 - 14672 (+)
Gene ID: MGYG000001157_21_10
Type: CAZyme
Location: 14647 - 16461 (+)
Type: CAZyme
Location: 14647 - 16461 (+)
Gene ID: MGYG000001157_21_11
Type:
Location: 16475 - 17269 (+)
Type:
Location: 16475 - 17269 (+)
Gene ID: MGYG000001157_21_12
Type: pfam
Location: 17396 - 19834 (-)
Type: pfam
Location: 17396 - 19834 (-)
Gene ID: MGYG000001157_21_13
Type: CAZyme
Location: 19789 - 22533 (-)
Type: CAZyme
Location: 19789 - 22533 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900540775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.