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Cluster: MGYG000001139_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001139_23 MGYG000001139_23_15 18875 19318 + 4.A.6.1.16
pfam MGYG000001139_23 MGYG000001139_23_16 19318 19599 + YajC
TC MGYG000001139_23 MGYG000001139_23_17 19636 20118 + 4.A.6.1.4
TC MGYG000001139_23 MGYG000001139_23_18 20209 21009 + 4.A.6.1.4
TC MGYG000001139_23 MGYG000001139_23_19 20999 22081 + 4.A.6.1.4
TF MGYG000001139_23 MGYG000001139_23_20 22267 22998 + GntR
STP MGYG000001139_23 MGYG000001139_23_21 23113 24279 + SIS | SIS
CAZyme MGYG000001139_23 MGYG000001139_23_22 24399 25568 + CE9
Gene ID: MGYG000001139_23_15
Type: TC
Location: 18875 - 19318 (+)
Gene ID: MGYG000001139_23_16
Type: pfam
Location: 19318 - 19599 (+)
Gene ID: MGYG000001139_23_17
Type: TC
Location: 19636 - 20118 (+)
Gene ID: MGYG000001139_23_18
Type: TC
Location: 20209 - 21009 (+)
Gene ID: MGYG000001139_23_19
Type: TC
Location: 20999 - 22081 (+)
Gene ID: MGYG000001139_23_20
Type: TF
Location: 22267 - 22998 (+)
Gene ID: MGYG000001139_23_21
Type: STP
Location: 23113 - 24279 (+)
Gene ID: MGYG000001139_23_22
Type: CAZyme
Location: 24399 - 25568 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001139_23_16 vegan > omnivore 1.13087 0.00566

🧭 Explore Read Mapping of CGC

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