Cluster: MGYG000001138_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001138
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001138_72 | MGYG000001138_72_15 | 13153 | 13689 | - | 4.A.1.2.6 |
| CAZyme | MGYG000001138_72 | MGYG000001138_72_16 | 13829 | 15277 | - | GH1 |
| TF | MGYG000001138_72 | MGYG000001138_72_17 | 15445 | 16437 | - | 0035607 |
| CAZyme | MGYG000001138_72 | MGYG000001138_72_18 | 16552 | 19143 | + | GH106 |
| TF | MGYG000001138_72 | MGYG000001138_72_19 | 19310 | 20164 | + | HTH_6 |
| STP | MGYG000001138_72 | MGYG000001138_72_20 | 20577 | 21257 | - | Pribosyltran |
| TC | MGYG000001138_72 | MGYG000001138_72_21 | 21694 | 24462 | + | 3.A.3.4.1 |
Gene ID: MGYG000001138_72_15
Type: TC
Location: 13153 - 13689 (-)
Type: TC
Location: 13153 - 13689 (-)
Gene ID: MGYG000001138_72_16
Type: CAZyme
Location: 13829 - 15277 (-)
Type: CAZyme
Location: 13829 - 15277 (-)
Gene ID: MGYG000001138_72_17
Type: TF
Location: 15445 - 16437 (-)
Type: TF
Location: 15445 - 16437 (-)
Gene ID: MGYG000001138_72_18
Type: CAZyme
Location: 16552 - 19143 (+)
Type: CAZyme
Location: 16552 - 19143 (+)
Gene ID: MGYG000001138_72_19
Type: TF
Location: 19310 - 20164 (+)
Type: TF
Location: 19310 - 20164 (+)
Gene ID: MGYG000001138_72_20
Type: STP
Location: 20577 - 21257 (-)
Type: STP
Location: 20577 - 21257 (-)
Gene ID: MGYG000001138_72_21
Type: TC
Location: 21694 - 24462 (+)
Type: TC
Location: 21694 - 24462 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902469435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.