Cluster: MGYG000001131_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: arabinogalactan
- Genome ID: MGYG000001131
- CGC Family ID: CGCFAM_00225
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001131_72 | MGYG000001131_72_15 | 15963 | 16970 | + | 9.B.97.1.11 |
| pfam | MGYG000001131_72 | MGYG000001131_72_16 | 17152 | 18546 | - | RmuC |
| CAZyme | MGYG000001131_72 | MGYG000001131_72_17 | 18550 | 21027 | - | GH127 |
| CAZyme | MGYG000001131_72 | MGYG000001131_72_18 | 21032 | 23011 | - | GH97 |
| CAZyme | MGYG000001131_72 | MGYG000001131_72_19 | 23216 | 26089 | + | GH146 |
| TC | MGYG000001131_72 | MGYG000001131_72_20 | 26127 | 29153 | + | 1.B.14.6.1 |
Gene ID: MGYG000001131_72_15
Type: TC
Location: 15963 - 16970 (+)
Type: TC
Location: 15963 - 16970 (+)
Gene ID: MGYG000001131_72_16
Type: pfam
Location: 17152 - 18546 (-)
Type: pfam
Location: 17152 - 18546 (-)
Gene ID: MGYG000001131_72_17
Type: CAZyme
Location: 18550 - 21027 (-)
Type: CAZyme
Location: 18550 - 21027 (-)
Gene ID: MGYG000001131_72_18
Type: CAZyme
Location: 21032 - 23011 (-)
Type: CAZyme
Location: 21032 - 23011 (-)
Gene ID: MGYG000001131_72_19
Type: CAZyme
Location: 23216 - 26089 (+)
Type: CAZyme
Location: 23216 - 26089 (+)
Gene ID: MGYG000001131_72_20
Type: TC
Location: 26127 - 29153 (+)
Type: TC
Location: 26127 - 29153 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900543585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.