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Cluster: MGYG000001122_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001122_42 MGYG000001122_42_4 2808 3977 - CE9
STP MGYG000001122_42 MGYG000001122_42_5 4095 5261 - SIS | SIS
TF MGYG000001122_42 MGYG000001122_42_6 5376 6107 - GntR
TC MGYG000001122_42 MGYG000001122_42_7 6293 7375 - 4.A.6.1.4
TC MGYG000001122_42 MGYG000001122_42_8 7365 8165 - 4.A.6.1.4
TC MGYG000001122_42 MGYG000001122_42_9 8256 8738 - 4.A.6.1.4
pfam MGYG000001122_42 MGYG000001122_42_10 8775 9056 - YajC
TC MGYG000001122_42 MGYG000001122_42_11 9056 9499 - 4.A.6.1.16
Gene ID: MGYG000001122_42_4
Type: CAZyme
Location: 2808 - 3977 (-)
Gene ID: MGYG000001122_42_5
Type: STP
Location: 4095 - 5261 (-)
Gene ID: MGYG000001122_42_6
Type: TF
Location: 5376 - 6107 (-)
Gene ID: MGYG000001122_42_7
Type: TC
Location: 6293 - 7375 (-)
Gene ID: MGYG000001122_42_8
Type: TC
Location: 7365 - 8165 (-)
Gene ID: MGYG000001122_42_9
Type: TC
Location: 8256 - 8738 (-)
Gene ID: MGYG000001122_42_10
Type: pfam
Location: 8775 - 9056 (-)
Gene ID: MGYG000001122_42_11
Type: TC
Location: 9056 - 9499 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001122_42_10 vegan > omnivore 1.06090 0.00701

🧭 Explore Read Mapping of CGC

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