Cluster: MGYG000001121_CGC7
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001121
- CGC Family ID: CGCFAM_00019
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001121_56 | MGYG000001121_56_70 | 97168 | 98550 | - | GH4 |
| TC | MGYG000001121_56 | MGYG000001121_56_71 | 98554 | 100170 | - | 4.A.1.1.3 |
| pfam | MGYG000001121_56 | MGYG000001121_56_72 | 100270 | 101136 | - | PRD | PRD | CAT_RBD |
| TC | MGYG000001121_56 | MGYG000001121_56_73 | 101143 | 101655 | - | 4.A.1.2.11 |
| NULL(UNKNOWN) | MGYG000001121_56 | MGYG000001121_56_74 | 101947 | 102555 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001121_56 | MGYG000001121_56_75 | 102750 | 104999 | - | 1.I.1.1.3 |
| STP | MGYG000001121_56 | MGYG000001121_56_76 | 105498 | 106460 | + | FHA |
| STP | MGYG000001121_56 | MGYG000001121_56_77 | 106632 | 108716 | + | Pkinase |
| TC | MGYG000001121_56 | MGYG000001121_56_78 | 109208 | 111547 | + | 3.A.3.5.15 |
Gene ID: MGYG000001121_56_70
Type: CAZyme
Location: 97168 - 98550 (-)
Type: CAZyme
Location: 97168 - 98550 (-)
Gene ID: MGYG000001121_56_71
Type: TC
Location: 98554 - 100170 (-)
Type: TC
Location: 98554 - 100170 (-)
Gene ID: MGYG000001121_56_72
Type: pfam
Location: 100270 - 101136 (-)
Type: pfam
Location: 100270 - 101136 (-)
Gene ID: MGYG000001121_56_73
Type: TC
Location: 101143 - 101655 (-)
Type: TC
Location: 101143 - 101655 (-)
Gene ID: MGYG000001121_56_74
Type:
Location: 101947 - 102555 (-)
Type:
Location: 101947 - 102555 (-)
Gene ID: MGYG000001121_56_75
Type: TC
Location: 102750 - 104999 (-)
Type: TC
Location: 102750 - 104999 (-)
Gene ID: MGYG000001121_56_76
Type: STP
Location: 105498 - 106460 (+)
Type: STP
Location: 105498 - 106460 (+)
Gene ID: MGYG000001121_56_77
Type: STP
Location: 106632 - 108716 (+)
Type: STP
Location: 106632 - 108716 (+)
Gene ID: MGYG000001121_56_78
Type: TC
Location: 109208 - 111547 (+)
Type: TC
Location: 109208 - 111547 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900757205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.