Cluster: MGYG000001112_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001112
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001112_12 | MGYG000001112_12_59 | 66881 | 67825 | + | 2.A.16.1.2 |
| TF | MGYG000001112_12 | MGYG000001112_12_60 | 67905 | 68618 | - | GntR |
| CAZyme | MGYG000001112_12 | MGYG000001112_12_61 | 68813 | 70333 | + | GH77 |
| CAZyme | MGYG000001112_12 | MGYG000001112_12_62 | 70323 | 72587 | + | GT35 |
| pfam | MGYG000001112_12 | MGYG000001112_12_63 | 72597 | 73388 | + | Exo_endo_phos |
| TC | MGYG000001112_12 | MGYG000001112_12_64 | 73399 | 75063 | + | 4.A.1.1.11 |
Gene ID: MGYG000001112_12_59
Type: TC
Location: 66881 - 67825 (+)
Type: TC
Location: 66881 - 67825 (+)
Gene ID: MGYG000001112_12_60
Type: TF
Location: 67905 - 68618 (-)
Type: TF
Location: 67905 - 68618 (-)
Gene ID: MGYG000001112_12_61
Type: CAZyme
Location: 68813 - 70333 (+)
Type: CAZyme
Location: 68813 - 70333 (+)
Gene ID: MGYG000001112_12_62
Type: CAZyme
Location: 70323 - 72587 (+)
Type: CAZyme
Location: 70323 - 72587 (+)
Gene ID: MGYG000001112_12_63
Type: pfam
Location: 72597 - 73388 (+)
Type: pfam
Location: 72597 - 73388 (+)
Gene ID: MGYG000001112_12_64
Type: TC
Location: 73399 - 75063 (+)
Type: TC
Location: 73399 - 75063 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp905205995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.