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Cluster: MGYG000001112_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001112_6 MGYG000001112_6_20 18555 19682 + GH102
TC MGYG000001112_6 MGYG000001112_6_21 19682 20443 + 3.A.16.1.3
TC MGYG000001112_6 MGYG000001112_6_22 20611 21603 + 3.A.1.15.5
pfam MGYG000001112_6 MGYG000001112_6_23 21722 23857 + UPF0020 | THUMP | Cons_hypoth95 | Methyltrans_SAM | RlmL_1st
TC MGYG000001112_6 MGYG000001112_6_24 23893 25797 - 2.A.37.1.2
Gene ID: MGYG000001112_6_20
Type: CAZyme
Location: 18555 - 19682 (+)
Gene ID: MGYG000001112_6_21
Type: TC
Location: 19682 - 20443 (+)
Gene ID: MGYG000001112_6_22
Type: TC
Location: 20611 - 21603 (+)
Gene ID: MGYG000001112_6_23
Type: pfam
Location: 21722 - 23857 (+)
Gene ID: MGYG000001112_6_24
Type: TC
Location: 23893 - 25797 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001112_6_20 vegetarian > omnivore 1.29354 0.00573
MGYG000001112_6_21 vegan > omnivore 1.46607 0.00918
MGYG000001112_6_21 vegetarian > omnivore 1.66566 0.00573
MGYG000001112_6_23 vegan > omnivore 1.35471 0.00918
MGYG000001112_6_23 vegetarian > omnivore 1.44724 0.00573
MGYG000001112_6_24 vegetarian > omnivore 1.08724 0.00573

🧭 Explore Read Mapping of CGC

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