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Cluster: MGYG000001112_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001112_3 MGYG000001112_3_38 37186 38067 + 3.A.1.15.4
TC MGYG000001112_3 MGYG000001112_3_39 38067 38963 + 3.A.1.15.4
TC MGYG000001112_3 MGYG000001112_3_40 38967 39818 + 3.A.1.15.4
TC MGYG000001112_3 MGYG000001112_3_41 39811 40644 + 3.A.1.15.4
pfam MGYG000001112_3 MGYG000001112_3_42 40679 41851 - MTS | tRNA_U5-meth_tr | Methyltransf_25 | Methyltransf_31
CAZyme MGYG000001112_3 MGYG000001112_3_43 41848 42891 - GH3
Gene ID: MGYG000001112_3_38
Type: TC
Location: 37186 - 38067 (+)
Gene ID: MGYG000001112_3_39
Type: TC
Location: 38067 - 38963 (+)
Gene ID: MGYG000001112_3_40
Type: TC
Location: 38967 - 39818 (+)
Gene ID: MGYG000001112_3_41
Type: TC
Location: 39811 - 40644 (+)
Gene ID: MGYG000001112_3_42
Type: pfam
Location: 40679 - 41851 (-)
Gene ID: MGYG000001112_3_43
Type: CAZyme
Location: 41848 - 42891 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001112_3_40 vegan > omnivore 2.24711 0.00918
MGYG000001112_3_40 vegetarian > omnivore 1.35213 0.00573
MGYG000001112_3_41 vegan > omnivore 2.09938 0.00918
MGYG000001112_3_41 vegetarian > omnivore 1.26051 0.00573
MGYG000001112_3_42 vegan > omnivore 1.25761 0.00918
MGYG000001112_3_42 vegetarian > omnivore 1.12949 0.00573

🧭 Explore Read Mapping of CGC

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