Cluster: MGYG000001112_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001112
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001112_26 | MGYG000001112_26_59 | 39409 | 39792 | - | 1.A.22.1.1 |
| TC | MGYG000001112_26 | MGYG000001112_26_60 | 39871 | 41247 | - | 2.A.38.1.1 |
| CAZyme | MGYG000001112_26 | MGYG000001112_26_61 | 41244 | 42059 | - | GT2 |
Gene ID: MGYG000001112_26_59
Type: TC
Location: 39409 - 39792 (-)
Type: TC
Location: 39409 - 39792 (-)
Gene ID: MGYG000001112_26_60
Type: TC
Location: 39871 - 41247 (-)
Type: TC
Location: 39871 - 41247 (-)
Gene ID: MGYG000001112_26_61
Type: CAZyme
Location: 41244 - 42059 (-)
Type: CAZyme
Location: 41244 - 42059 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp905205995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001112_26_59 | vegan > omnivore | 1.64219 | 0.00918 |
| MGYG000001112_26_59 | vegetarian > omnivore | 2.98090 | 0.00573 |
| MGYG000001112_26_59 | vegetarian > vegan | 1.33871 | 0.02723 |
| MGYG000001112_26_60 | vegetarian > omnivore | 1.40869 | 0.00573 |
| MGYG000001112_26_61 | vegan > omnivore | 1.57713 | 0.00918 |
| MGYG000001112_26_61 | vegetarian > omnivore | 1.11700 | 0.00573 |