Cluster: MGYG000001112_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001112
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001112_17 | MGYG000001112_17_6 | 4195 | 4500 | + | 9.B.21.2.1 |
| TC | MGYG000001112_17 | MGYG000001112_17_7 | 4500 | 6365 | + | 2.A.16.2.2 |
| pfam | MGYG000001112_17 | MGYG000001112_17_8 | 6408 | 7949 | - | PFL-like | YjjI-like |
| TC | MGYG000001112_17 | MGYG000001112_17_9 | 8140 | 8805 | + | 2.A.115.2.7 |
| CAZyme | MGYG000001112_17 | MGYG000001112_17_10 | 8755 | 9783 | - | GT9 |
Gene ID: MGYG000001112_17_6
Type: TC
Location: 4195 - 4500 (+)
Type: TC
Location: 4195 - 4500 (+)
Gene ID: MGYG000001112_17_7
Type: TC
Location: 4500 - 6365 (+)
Type: TC
Location: 4500 - 6365 (+)
Gene ID: MGYG000001112_17_8
Type: pfam
Location: 6408 - 7949 (-)
Type: pfam
Location: 6408 - 7949 (-)
Gene ID: MGYG000001112_17_9
Type: TC
Location: 8140 - 8805 (+)
Type: TC
Location: 8140 - 8805 (+)
Gene ID: MGYG000001112_17_10
Type: CAZyme
Location: 8755 - 9783 (-)
Type: CAZyme
Location: 8755 - 9783 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp905205995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001112_17_9 | vegan > omnivore | 1.47702 | 0.00918 |
| MGYG000001112_17_9 | vegetarian > omnivore | 1.56129 | 0.00573 |
| MGYG000001112_17_10 | vegan > omnivore | 1.49120 | 0.00918 |
| MGYG000001112_17_10 | vegetarian > omnivore | 1.23022 | 0.00573 |