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Cluster: MGYG000001105_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001105_25 MGYG000001105_25_3 3060 4565 + GH77
CAZyme MGYG000001105_25 MGYG000001105_25_4 4694 6961 + GT35
TC MGYG000001105_25 MGYG000001105_25_5 7336 8535 - 3.A.1.1.22
TC MGYG000001105_25 MGYG000001105_25_6 8604 9443 - 3.A.1.1.45
TC MGYG000001105_25 MGYG000001105_25_7 9443 10297 - 3.A.1.1.45
TC MGYG000001105_25 MGYG000001105_25_8 10385 11701 - 3.A.1.1.45
TF MGYG000001105_25 MGYG000001105_25_9 12008 12727 - GntR
NULL(UNKNOWN) MGYG000001105_25 MGYG000001105_25_10 12811 12930 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000001105_25 MGYG000001105_25_11 12952 15402 + 4.A.1.1.8
Gene ID: MGYG000001105_25_3
Type: CAZyme
Location: 3060 - 4565 (+)
Gene ID: MGYG000001105_25_4
Type: CAZyme
Location: 4694 - 6961 (+)
Gene ID: MGYG000001105_25_5
Type: TC
Location: 7336 - 8535 (-)
Gene ID: MGYG000001105_25_6
Type: TC
Location: 8604 - 9443 (-)
Gene ID: MGYG000001105_25_7
Type: TC
Location: 9443 - 10297 (-)
Gene ID: MGYG000001105_25_8
Type: TC
Location: 10385 - 11701 (-)
Gene ID: MGYG000001105_25_9
Type: TF
Location: 12008 - 12727 (-)
Gene ID: MGYG000001105_25_10
Type:
Location: 12811 - 12930 (-)
Gene ID: MGYG000001105_25_11
Type: TC
Location: 12952 - 15402 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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