Cluster: MGYG000001105_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001105
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001105_3 | MGYG000001105_3_17 | 22878 | 25886 | + | GH2 |
| NULL(UNKNOWN) | MGYG000001105_3 | MGYG000001105_3_18 | 25890 | 26345 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001105_3 | MGYG000001105_3_19 | 26499 | 27962 | + | 2.A.3.7.4 |
| STP | MGYG000001105_3 | MGYG000001105_3_20 | 28384 | 28632 | + | PTS-HPr |
| STP | MGYG000001105_3 | MGYG000001105_3_21 | 28868 | 29110 | + | FeoA |
| TC | MGYG000001105_3 | MGYG000001105_3_22 | 29150 | 29371 | + | 9.A.8.1.6 |
| TC | MGYG000001105_3 | MGYG000001105_3_23 | 29495 | 31822 | + | 9.A.8.1.6 |
Gene ID: MGYG000001105_3_17
Type: CAZyme
Location: 22878 - 25886 (+)
Type: CAZyme
Location: 22878 - 25886 (+)
Gene ID: MGYG000001105_3_18
Type:
Location: 25890 - 26345 (+)
Type:
Location: 25890 - 26345 (+)
Gene ID: MGYG000001105_3_19
Type: TC
Location: 26499 - 27962 (+)
Type: TC
Location: 26499 - 27962 (+)
Gene ID: MGYG000001105_3_20
Type: STP
Location: 28384 - 28632 (+)
Type: STP
Location: 28384 - 28632 (+)
Gene ID: MGYG000001105_3_21
Type: STP
Location: 28868 - 29110 (+)
Type: STP
Location: 28868 - 29110 (+)
Gene ID: MGYG000001105_3_22
Type: TC
Location: 29150 - 29371 (+)
Type: TC
Location: 29150 - 29371 (+)
Gene ID: MGYG000001105_3_23
Type: TC
Location: 29495 - 31822 (+)
Type: TC
Location: 29495 - 31822 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902469185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.