Cluster: MGYG000001093_CGC22
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001093
- CGC Family ID: CGCFAM_08746
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001093_120 | MGYG000001093_120_1 | 9 | 2090 | - | 1.B.6.1.14 |
| TC | MGYG000001093_120 | MGYG000001093_120_2 | 2065 | 3000 | - | 9.B.172.1.1 |
| pfam | MGYG000001093_120 | MGYG000001093_120_3 | 3016 | 5655 | - | CHU_C |
| TC | MGYG000001093_120 | MGYG000001093_120_4 | 5751 | 6857 | - | 3.A.1.5.15 |
| TC | MGYG000001093_120 | MGYG000001093_120_5 | 6878 | 9172 | - | 9.B.174.1.2 |
| pfam | MGYG000001093_120 | MGYG000001093_120_6 | 9379 | 10161 | + | SurE |
| CAZyme | MGYG000001093_120 | MGYG000001093_120_7 | 10189 | 11304 | + | GT19 |
| peptidase | MGYG000001093_120 | MGYG000001093_120_8 | 11587 | 12264 | + | C40.UPW |
| TC | MGYG000001093_120 | MGYG000001093_120_9 | 12301 | 14331 | + | 3.A.11.1.1 |
| pfam | MGYG000001093_120 | MGYG000001093_120_10 | 14333 | 14794 | - | Thioredoxin | Thioredox_DsbH | Thioredoxin_2 | Thioredoxin_7 |
| TC | MGYG000001093_120 | MGYG000001093_120_11 | 14838 | 16553 | - | 2.A.17.1.1 |
| TC | MGYG000001093_120 | MGYG000001093_120_12 | 16579 | 18726 | - | 2.A.17.1.7 |
| TC | MGYG000001093_120 | MGYG000001093_120_13 | 18750 | 20450 | - | 2.A.17.1.7 |
| TC | MGYG000001093_120 | MGYG000001093_120_14 | 20458 | 22626 | - | 8.A.51.1.1 |
| pfam | MGYG000001093_120 | MGYG000001093_120_15 | 22828 | 23781 | + | YARHG |
| TC | MGYG000001093_120 | MGYG000001093_120_16 | 23990 | 25312 | + | 2.A.6.6.11 |
Gene ID: MGYG000001093_120_1
Type: TC
Location: 9 - 2090 (-)
Type: TC
Location: 9 - 2090 (-)
Gene ID: MGYG000001093_120_2
Type: TC
Location: 2065 - 3000 (-)
Type: TC
Location: 2065 - 3000 (-)
Gene ID: MGYG000001093_120_3
Type: pfam
Location: 3016 - 5655 (-)
Type: pfam
Location: 3016 - 5655 (-)
Gene ID: MGYG000001093_120_4
Type: TC
Location: 5751 - 6857 (-)
Type: TC
Location: 5751 - 6857 (-)
Gene ID: MGYG000001093_120_5
Type: TC
Location: 6878 - 9172 (-)
Type: TC
Location: 6878 - 9172 (-)
Gene ID: MGYG000001093_120_6
Type: pfam
Location: 9379 - 10161 (+)
Type: pfam
Location: 9379 - 10161 (+)
Gene ID: MGYG000001093_120_7
Type: CAZyme
Location: 10189 - 11304 (+)
Type: CAZyme
Location: 10189 - 11304 (+)
Gene ID: MGYG000001093_120_8
Type: peptidase
Location: 11587 - 12264 (+)
Type: peptidase
Location: 11587 - 12264 (+)
Gene ID: MGYG000001093_120_9
Type: TC
Location: 12301 - 14331 (+)
Type: TC
Location: 12301 - 14331 (+)
Gene ID: MGYG000001093_120_10
Type: pfam
Location: 14333 - 14794 (-)
Type: pfam
Location: 14333 - 14794 (-)
Gene ID: MGYG000001093_120_11
Type: TC
Location: 14838 - 16553 (-)
Type: TC
Location: 14838 - 16553 (-)
Gene ID: MGYG000001093_120_12
Type: TC
Location: 16579 - 18726 (-)
Type: TC
Location: 16579 - 18726 (-)
Gene ID: MGYG000001093_120_13
Type: TC
Location: 18750 - 20450 (-)
Type: TC
Location: 18750 - 20450 (-)
Gene ID: MGYG000001093_120_14
Type: TC
Location: 20458 - 22626 (-)
Type: TC
Location: 20458 - 22626 (-)
Gene ID: MGYG000001093_120_15
Type: pfam
Location: 22828 - 23781 (+)
Type: pfam
Location: 22828 - 23781 (+)
Gene ID: MGYG000001093_120_16
Type: TC
Location: 23990 - 25312 (+)
Type: TC
Location: 23990 - 25312 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Species
Flavobacterium lindanitolerans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.