Cluster: MGYG000001093_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001093
- CGC Family ID: CGCFAM_00003
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001093_78 | MGYG000001093_78_1 | 1 | 450 | + | GT4 |
| CAZyme | MGYG000001093_78 | MGYG000001093_78_2 | 428 | 1543 | + | GT4 |
| pfam | MGYG000001093_78 | MGYG000001093_78_3 | 1571 | 2554 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | GDP_Man_Dehyd |
| TC | MGYG000001093_78 | MGYG000001093_78_4 | 2606 | 3907 | + | 9.B.18.1.1 |
| CAZyme | MGYG000001093_78 | MGYG000001093_78_5 | 3910 | 4686 | + | GT2 |
Gene ID: MGYG000001093_78_1
Type: CAZyme
Location: 1 - 450 (+)
Type: CAZyme
Location: 1 - 450 (+)
Gene ID: MGYG000001093_78_2
Type: CAZyme
Location: 428 - 1543 (+)
Type: CAZyme
Location: 428 - 1543 (+)
Gene ID: MGYG000001093_78_3
Type: pfam
Location: 1571 - 2554 (+)
Type: pfam
Location: 1571 - 2554 (+)
Gene ID: MGYG000001093_78_4
Type: TC
Location: 2606 - 3907 (+)
Type: TC
Location: 2606 - 3907 (+)
Gene ID: MGYG000001093_78_5
Type: CAZyme
Location: 3910 - 4686 (+)
Type: CAZyme
Location: 3910 - 4686 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Species
Flavobacterium lindanitolerans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.