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Cluster: MGYG000001093_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000001093_8 MGYG000001093_8_2 2914 5817 - GH13
pfam MGYG000001093_8 MGYG000001093_8_3 5876 7000 - SusE | SusF_SusE
pfam MGYG000001093_8 MGYG000001093_8_4 7023 8624 - SusD_RagB | SusD-like_3
TC MGYG000001093_8 MGYG000001093_8_5 8637 11585 - 1.B.14.6.1
TF MGYG000001093_8 MGYG000001093_8_6 11812 12837 + LacI
TC MGYG000001093_8 MGYG000001093_8_7 13042 14388 + 2.A.2.6.3
pfam MGYG000001093_8 MGYG000001093_8_8 14393 15049 + Hydrolase | HAD_2
CAZyme MGYG000001093_8 MGYG000001093_8_9 15051 17360 + GH65
CAZyme MGYG000001093_8 MGYG000001093_8_10 17421 19265 + GH13_46
pfam MGYG000001093_8 MGYG000001093_8_11 19428 19805 + PDDEXK_3
CAZyme MGYG000001093_8 MGYG000001093_8_12 19848 21284 + GH13
Gene ID: MGYG000001093_8_2
Type: CAZyme
Location: 2914 - 5817 (-)
Gene ID: MGYG000001093_8_3
Type: pfam
Location: 5876 - 7000 (-)
Gene ID: MGYG000001093_8_4
Type: pfam
Location: 7023 - 8624 (-)
Gene ID: MGYG000001093_8_5
Type: TC
Location: 8637 - 11585 (-)
Gene ID: MGYG000001093_8_6
Type: TF
Location: 11812 - 12837 (+)
Gene ID: MGYG000001093_8_7
Type: TC
Location: 13042 - 14388 (+)
Gene ID: MGYG000001093_8_8
Type: pfam
Location: 14393 - 15049 (+)
Gene ID: MGYG000001093_8_9
Type: CAZyme
Location: 15051 - 17360 (+)
Gene ID: MGYG000001093_8_10
Type: CAZyme
Location: 17421 - 19265 (+)
Gene ID: MGYG000001093_8_11
Type: pfam
Location: 19428 - 19805 (+)
Gene ID: MGYG000001093_8_12
Type: CAZyme
Location: 19848 - 21284 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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