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Cluster: MGYG000001090_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001090_8 MGYG000001090_8_3 3788 4846 + 2.A.7.18.1
pfam MGYG000001090_8 MGYG000001090_8_4 4912 5994 + Stealth_CR2 | Stealth_CR1 | Stealth_CR3
pfam MGYG000001090_8 MGYG000001090_8_5 6009 6803 - LicD
TC MGYG000001090_8 MGYG000001090_8_6 6800 8098 - 2.A.66.2.16
pfam MGYG000001090_8 MGYG000001090_8_7 8291 9328 + Stealth_CR2 | Stealth_CR1 | Stealth_CR3
CAZyme MGYG000001090_8 MGYG000001090_8_8 9360 10472 - GT4
CAZyme MGYG000001090_8 MGYG000001090_8_9 10587 11342 + GT2
pfam MGYG000001090_8 MGYG000001090_8_10 11339 11689 + DUF2304
CAZyme MGYG000001090_8 MGYG000001090_8_11 11676 12824 + GT4
pfam MGYG000001090_8 MGYG000001090_8_12 12821 14254 + Polysacc_synt | Polysacc_synt_3
pfam MGYG000001090_8 MGYG000001090_8_13 14312 16330 + DUF6541
CAZyme MGYG000001090_8 MGYG000001090_8_14 16361 18241 + GT2
Gene ID: MGYG000001090_8_3
Type: TC
Location: 3788 - 4846 (+)
Gene ID: MGYG000001090_8_4
Type: pfam
Location: 4912 - 5994 (+)
Gene ID: MGYG000001090_8_5
Type: pfam
Location: 6009 - 6803 (-)
Gene ID: MGYG000001090_8_6
Type: TC
Location: 6800 - 8098 (-)
Gene ID: MGYG000001090_8_7
Type: pfam
Location: 8291 - 9328 (+)
Gene ID: MGYG000001090_8_8
Type: CAZyme
Location: 9360 - 10472 (-)
Gene ID: MGYG000001090_8_9
Type: CAZyme
Location: 10587 - 11342 (+)
Gene ID: MGYG000001090_8_10
Type: pfam
Location: 11339 - 11689 (+)
Gene ID: MGYG000001090_8_11
Type: CAZyme
Location: 11676 - 12824 (+)
Gene ID: MGYG000001090_8_12
Type: pfam
Location: 12821 - 14254 (+)
Gene ID: MGYG000001090_8_13
Type: pfam
Location: 14312 - 16330 (+)
Gene ID: MGYG000001090_8_14
Type: CAZyme
Location: 16361 - 18241 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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