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Cluster: MGYG000001081_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001081_108 MGYG000001081_108_2 459 1220 - 3.A.1.103.1
pfam MGYG000001081_108 MGYG000001081_108_3 1233 2018 - ABC2_membrane
CAZyme MGYG000001081_108 MGYG000001081_108_4 2035 3111 - GT8
CAZyme MGYG000001081_108 MGYG000001081_108_5 3128 5539 - GT4
pfam MGYG000001081_108 MGYG000001081_108_6 5536 5925 - CTP_transf_like
pfam MGYG000001081_108 MGYG000001081_108_7 5922 6755 - LicD
CAZyme MGYG000001081_108 MGYG000001081_108_8 6771 7784 - GT2
CAZyme MGYG000001081_108 MGYG000001081_108_9 7785 8639 - GT111
CAZyme MGYG000001081_108 MGYG000001081_108_10 8821 9960 - GT4
Gene ID: MGYG000001081_108_2
Type: TC
Location: 459 - 1220 (-)
Gene ID: MGYG000001081_108_3
Type: pfam
Location: 1233 - 2018 (-)
Gene ID: MGYG000001081_108_4
Type: CAZyme
Location: 2035 - 3111 (-)
Gene ID: MGYG000001081_108_5
Type: CAZyme
Location: 3128 - 5539 (-)
Gene ID: MGYG000001081_108_6
Type: pfam
Location: 5536 - 5925 (-)
Gene ID: MGYG000001081_108_7
Type: pfam
Location: 5922 - 6755 (-)
Gene ID: MGYG000001081_108_8
Type: CAZyme
Location: 6771 - 7784 (-)
Gene ID: MGYG000001081_108_9
Type: CAZyme
Location: 7785 - 8639 (-)
Gene ID: MGYG000001081_108_10
Type: CAZyme
Location: 8821 - 9960 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001081_108_2 vegetarian > omnivore 1.18356 0.04738
MGYG000001081_108_3 vegetarian > omnivore 2.05180 0.01548
MGYG000001081_108_3 vegetarian > vegan 1.01315 0.00290

🧭 Explore Read Mapping of CGC

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