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Cluster: MGYG000001081_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001081_1 MGYG000001081_1_12 11353 12243 - 3.A.1.1.29
TC MGYG000001081_1 MGYG000001081_1_13 12282 13214 - 3.A.1.1.29
pfam MGYG000001081_1 MGYG000001081_1_14 13282 15078 - SBP_bac_1
TC MGYG000001081_1 MGYG000001081_1_15 15137 16867 - 9.B.33.1.1
TF MGYG000001081_1 MGYG000001081_1_16 16909 18447 - HTH_AraC | HTH_AraC
pfam MGYG000001081_1 MGYG000001081_1_17 18651 19445 - Lactamase_B
TC MGYG000001081_1 MGYG000001081_1_18 19489 20883 - 2.A.66.1.23
CAZyme MGYG000001081_1 MGYG000001081_1_19 20899 23091 - GH2
Gene ID: MGYG000001081_1_12
Type: TC
Location: 11353 - 12243 (-)
Gene ID: MGYG000001081_1_13
Type: TC
Location: 12282 - 13214 (-)
Gene ID: MGYG000001081_1_14
Type: pfam
Location: 13282 - 15078 (-)
Gene ID: MGYG000001081_1_15
Type: TC
Location: 15137 - 16867 (-)
Gene ID: MGYG000001081_1_16
Type: TF
Location: 16909 - 18447 (-)
Gene ID: MGYG000001081_1_17
Type: pfam
Location: 18651 - 19445 (-)
Gene ID: MGYG000001081_1_18
Type: TC
Location: 19489 - 20883 (-)
Gene ID: MGYG000001081_1_19
Type: CAZyme
Location: 20899 - 23091 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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