Cluster: MGYG000001076_CGC10
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 10
- Substrate:
- Genome ID: MGYG000001076
- CGC Family ID: CGCFAM_00015
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001076_122 | MGYG000001076_122_1 | 268 | 1380 | + | GT4 |
| pfam | MGYG000001076_122 | MGYG000001076_122_2 | 1385 | 2467 | + | PS_pyruv_trans |
| CAZyme | MGYG000001076_122 | MGYG000001076_122_3 | 2491 | 3393 | + | GT14 |
| NULL(UNKNOWN) | MGYG000001076_122 | MGYG000001076_122_4 | 3431 | 4594 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001076_122 | MGYG000001076_122_5 | 4569 | 5555 | + | GT2 |
| pfam | MGYG000001076_122 | MGYG000001076_122_6 | 5624 | 6646 | + | Acyl_transf_3 |
| pfam | MGYG000001076_122 | MGYG000001076_122_7 | 6691 | 7752 | + | Acyl_transf_3 |
| CAZyme | MGYG000001076_122 | MGYG000001076_122_8 | 7754 | 8752 | + | GT2 |
| CAZyme | MGYG000001076_122 | MGYG000001076_122_9 | 8803 | 9843 | + | GT2 |
| TC | MGYG000001076_122 | MGYG000001076_122_10 | 9906 | 11504 | + | 2.A.66.1.40 |
| CAZyme | MGYG000001076_122 | MGYG000001076_122_11 | 11519 | 12415 | + | GT101 |
| CAZyme | MGYG000001076_122 | MGYG000001076_122_12 | 12447 | 13445 | + | GT2 |
| CAZyme | MGYG000001076_122 | MGYG000001076_122_13 | 13462 | 15318 | + | GT101 | GT2 |
| CAZyme | MGYG000001076_122 | MGYG000001076_122_14 | 15339 | 16379 | + | GT2 |
| CAZyme | MGYG000001076_122 | MGYG000001076_122_15 | 16455 | 17414 | + | GT2 |
Gene ID: MGYG000001076_122_1
Type: CAZyme
Location: 268 - 1380 (+)
Type: CAZyme
Location: 268 - 1380 (+)
Gene ID: MGYG000001076_122_2
Type: pfam
Location: 1385 - 2467 (+)
Type: pfam
Location: 1385 - 2467 (+)
Gene ID: MGYG000001076_122_3
Type: CAZyme
Location: 2491 - 3393 (+)
Type: CAZyme
Location: 2491 - 3393 (+)
Gene ID: MGYG000001076_122_4
Type:
Location: 3431 - 4594 (+)
Type:
Location: 3431 - 4594 (+)
Gene ID: MGYG000001076_122_5
Type: CAZyme
Location: 4569 - 5555 (+)
Type: CAZyme
Location: 4569 - 5555 (+)
Gene ID: MGYG000001076_122_6
Type: pfam
Location: 5624 - 6646 (+)
Type: pfam
Location: 5624 - 6646 (+)
Gene ID: MGYG000001076_122_7
Type: pfam
Location: 6691 - 7752 (+)
Type: pfam
Location: 6691 - 7752 (+)
Gene ID: MGYG000001076_122_8
Type: CAZyme
Location: 7754 - 8752 (+)
Type: CAZyme
Location: 7754 - 8752 (+)
Gene ID: MGYG000001076_122_9
Type: CAZyme
Location: 8803 - 9843 (+)
Type: CAZyme
Location: 8803 - 9843 (+)
Gene ID: MGYG000001076_122_10
Type: TC
Location: 9906 - 11504 (+)
Type: TC
Location: 9906 - 11504 (+)
Gene ID: MGYG000001076_122_11
Type: CAZyme
Location: 11519 - 12415 (+)
Type: CAZyme
Location: 11519 - 12415 (+)
Gene ID: MGYG000001076_122_12
Type: CAZyme
Location: 12447 - 13445 (+)
Type: CAZyme
Location: 12447 - 13445 (+)
Gene ID: MGYG000001076_122_13
Type: CAZyme
Location: 13462 - 15318 (+)
Type: CAZyme
Location: 13462 - 15318 (+)
Gene ID: MGYG000001076_122_14
Type: CAZyme
Location: 15339 - 16379 (+)
Type: CAZyme
Location: 15339 - 16379 (+)
Gene ID: MGYG000001076_122_15
Type: CAZyme
Location: 16455 - 17414 (+)
Type: CAZyme
Location: 16455 - 17414 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-411
Species
CAG-411 sp000437275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.