Cluster: MGYG000001059_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: pectin/alpha-glucan
- Genome ID: MGYG000001059
- CGC Family ID: CGCFAM_00025
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001059_31 | MGYG000001059_31_1 | 353 | 2566 | - | GH13_10 |
| CAZyme | MGYG000001059_31 | MGYG000001059_31_2 | 2563 | 4431 | - | GH13_46 |
| pfam | MGYG000001059_31 | MGYG000001059_31_3 | 4508 | 5587 | - | SusE | SusF_SusE |
| TC | MGYG000001059_31 | MGYG000001059_31_4 | 5597 | 7114 | - | 8.A.46.1.1 |
| TC | MGYG000001059_31 | MGYG000001059_31_5 | 7130 | 10129 | - | 1.B.14.6.1 |
| CAZyme | MGYG000001059_31 | MGYG000001059_31_6 | 10149 | 12275 | - | GH97 |
Gene ID: MGYG000001059_31_1
Type: CAZyme
Location: 353 - 2566 (-)
Type: CAZyme
Location: 353 - 2566 (-)
Gene ID: MGYG000001059_31_2
Type: CAZyme
Location: 2563 - 4431 (-)
Type: CAZyme
Location: 2563 - 4431 (-)
Gene ID: MGYG000001059_31_3
Type: pfam
Location: 4508 - 5587 (-)
Type: pfam
Location: 4508 - 5587 (-)
Gene ID: MGYG000001059_31_4
Type: TC
Location: 5597 - 7114 (-)
Type: TC
Location: 5597 - 7114 (-)
Gene ID: MGYG000001059_31_5
Type: TC
Location: 7130 - 10129 (-)
Type: TC
Location: 7130 - 10129 (-)
Gene ID: MGYG000001059_31_6
Type: CAZyme
Location: 10149 - 12275 (-)
Type: CAZyme
Location: 10149 - 12275 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A somerae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.