Cluster: MGYG000001059_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001059
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001059_24 | MGYG000001059_24_2 | 2520 | 3956 | - | 9.B.126.2.2 |
| pfam | MGYG000001059_24 | MGYG000001059_24_3 | 5211 | 6215 | - | CbiK |
| TC | MGYG000001059_24 | MGYG000001059_24_4 | 6249 | 8399 | - | 1.B.14.10.2 |
| pfam | MGYG000001059_24 | MGYG000001059_24_5 | 9104 | 10420 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| pfam | MGYG000001059_24 | MGYG000001059_24_6 | 10441 | 10953 | + | META |
| CAZyme | MGYG000001059_24 | MGYG000001059_24_7 | 11088 | 13607 | + | GH2 |
Gene ID: MGYG000001059_24_2
Type: TC
Location: 2520 - 3956 (-)
Type: TC
Location: 2520 - 3956 (-)
Gene ID: MGYG000001059_24_3
Type: pfam
Location: 5211 - 6215 (-)
Type: pfam
Location: 5211 - 6215 (-)
Gene ID: MGYG000001059_24_4
Type: TC
Location: 6249 - 8399 (-)
Type: TC
Location: 6249 - 8399 (-)
Gene ID: MGYG000001059_24_5
Type: pfam
Location: 9104 - 10420 (+)
Type: pfam
Location: 9104 - 10420 (+)
Gene ID: MGYG000001059_24_6
Type: pfam
Location: 10441 - 10953 (+)
Type: pfam
Location: 10441 - 10953 (+)
Gene ID: MGYG000001059_24_7
Type: CAZyme
Location: 11088 - 13607 (+)
Type: CAZyme
Location: 11088 - 13607 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A somerae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.