Cluster: MGYG000001059_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001059
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001059_19 | MGYG000001059_19_21 | 34965 | 36371 | - | 2.A.6.2.20 |
| TC | MGYG000001059_19 | MGYG000001059_19_22 | 36349 | 39504 | - | 2.A.6.2.22 |
| TC | MGYG000001059_19 | MGYG000001059_19_23 | 39504 | 40628 | - | 2.A.6.2.41 |
| CAZyme | MGYG000001059_19 | MGYG000001059_19_24 | 40946 | 43912 | - | GH3 |
| pfam | MGYG000001059_19 | MGYG000001059_19_25 | 43995 | 44984 | - | Abi_2 |
| TC | MGYG000001059_19 | MGYG000001059_19_26 | 45139 | 46806 | + | 4.C.1.1.4 |
| CAZyme | MGYG000001059_19 | MGYG000001059_19_27 | 47271 | 49841 | + | GT35 |
Gene ID: MGYG000001059_19_21
Type: TC
Location: 34965 - 36371 (-)
Type: TC
Location: 34965 - 36371 (-)
Gene ID: MGYG000001059_19_22
Type: TC
Location: 36349 - 39504 (-)
Type: TC
Location: 36349 - 39504 (-)
Gene ID: MGYG000001059_19_23
Type: TC
Location: 39504 - 40628 (-)
Type: TC
Location: 39504 - 40628 (-)
Gene ID: MGYG000001059_19_24
Type: CAZyme
Location: 40946 - 43912 (-)
Type: CAZyme
Location: 40946 - 43912 (-)
Gene ID: MGYG000001059_19_25
Type: pfam
Location: 43995 - 44984 (-)
Type: pfam
Location: 43995 - 44984 (-)
Gene ID: MGYG000001059_19_26
Type: TC
Location: 45139 - 46806 (+)
Type: TC
Location: 45139 - 46806 (+)
Gene ID: MGYG000001059_19_27
Type: CAZyme
Location: 47271 - 49841 (+)
Type: CAZyme
Location: 47271 - 49841 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A somerae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.