Cluster: MGYG000001059_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001059
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001059_16 | MGYG000001059_16_29 | 25109 | 27712 | - | 3.A.9.1.2 |
| CAZyme | MGYG000001059_16 | MGYG000001059_16_30 | 27901 | 30192 | - | GH20 |
| STP | MGYG000001059_16 | MGYG000001059_16_31 | 30189 | 31244 | - | Aminotran_1_2 |
| NULL(UNKNOWN) | MGYG000001059_16 | MGYG000001059_16_32 | 31518 | 32222 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001059_16 | MGYG000001059_16_33 | 32246 | 34186 | + | 3.D.10.1.5 |
| TC | MGYG000001059_16 | MGYG000001059_16_34 | 34217 | 34972 | + | 3.D.10.1.5 |
Gene ID: MGYG000001059_16_29
Type: TC
Location: 25109 - 27712 (-)
Type: TC
Location: 25109 - 27712 (-)
Gene ID: MGYG000001059_16_30
Type: CAZyme
Location: 27901 - 30192 (-)
Type: CAZyme
Location: 27901 - 30192 (-)
Gene ID: MGYG000001059_16_31
Type: STP
Location: 30189 - 31244 (-)
Type: STP
Location: 30189 - 31244 (-)
Gene ID: MGYG000001059_16_32
Type:
Location: 31518 - 32222 (+)
Type:
Location: 31518 - 32222 (+)
Gene ID: MGYG000001059_16_33
Type: TC
Location: 32246 - 34186 (+)
Type: TC
Location: 32246 - 34186 (+)
Gene ID: MGYG000001059_16_34
Type: TC
Location: 34217 - 34972 (+)
Type: TC
Location: 34217 - 34972 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A somerae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.