Cluster: MGYG000001059_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001059
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001059_80 | MGYG000001059_80_2 | 1547 | 2500 | + | 3.A.5.1.1 |
| pfam | MGYG000001059_80 | MGYG000001059_80_3 | 2530 | 3795 | + | UPF0004 | Radical_SAM | TRAM_2 |
| NULL(UNKNOWN) | MGYG000001059_80 | MGYG000001059_80_4 | 3792 | 4949 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001059_80 | MGYG000001059_80_5 | 4946 | 7174 | + | GH92 |
Gene ID: MGYG000001059_80_2
Type: TC
Location: 1547 - 2500 (+)
Type: TC
Location: 1547 - 2500 (+)
Gene ID: MGYG000001059_80_3
Type: pfam
Location: 2530 - 3795 (+)
Type: pfam
Location: 2530 - 3795 (+)
Gene ID: MGYG000001059_80_4
Type:
Location: 3792 - 4949 (+)
Type:
Location: 3792 - 4949 (+)
Gene ID: MGYG000001059_80_5
Type: CAZyme
Location: 4946 - 7174 (+)
Type: CAZyme
Location: 4946 - 7174 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A somerae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.