Cluster: MGYG000001059_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001059
- CGC Family ID: CGCFAM_09539
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001059_15 | MGYG000001059_15_42 | 43138 | 45810 | - | 3.A.3.2.14 |
| TC | MGYG000001059_15 | MGYG000001059_15_43 | 46735 | 49788 | + | 1.B.14.6.13 |
| TC | MGYG000001059_15 | MGYG000001059_15_44 | 49814 | 51472 | + | 8.A.46.2.1 |
| CAZyme | MGYG000001059_15 | MGYG000001059_15_45 | 51494 | 52606 | + | GH18 |
| pfam | MGYG000001059_15 | MGYG000001059_15_46 | 52632 | 53825 | + | BT_3987-like_N | Laminin_G_3 |
| pfam | MGYG000001059_15 | MGYG000001059_15_47 | 54336 | 56735 | + | ATP-cone | NRDD |
| TC | MGYG000001059_15 | MGYG000001059_15_48 | 56754 | 58427 | + | 2.A.81.1.2 |
Gene ID: MGYG000001059_15_42
Type: TC
Location: 43138 - 45810 (-)
Type: TC
Location: 43138 - 45810 (-)
Gene ID: MGYG000001059_15_43
Type: TC
Location: 46735 - 49788 (+)
Type: TC
Location: 46735 - 49788 (+)
Gene ID: MGYG000001059_15_44
Type: TC
Location: 49814 - 51472 (+)
Type: TC
Location: 49814 - 51472 (+)
Gene ID: MGYG000001059_15_45
Type: CAZyme
Location: 51494 - 52606 (+)
Type: CAZyme
Location: 51494 - 52606 (+)
Gene ID: MGYG000001059_15_46
Type: pfam
Location: 52632 - 53825 (+)
Type: pfam
Location: 52632 - 53825 (+)
Gene ID: MGYG000001059_15_47
Type: pfam
Location: 54336 - 56735 (+)
Type: pfam
Location: 54336 - 56735 (+)
Gene ID: MGYG000001059_15_48
Type: TC
Location: 56754 - 58427 (+)
Type: TC
Location: 56754 - 58427 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A somerae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.