Cluster: MGYG000001059_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000001059
- CGC Family ID: CGCFAM_00489
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001059_74 | MGYG000001059_74_26 | 27244 | 28245 | + | GT2 |
| NULL(UNKNOWN) | MGYG000001059_74 | MGYG000001059_74_27 | 28260 | 29534 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001059_74 | MGYG000001059_74_28 | 29541 | 30689 | + | GT4 |
| CAZyme | MGYG000001059_74 | MGYG000001059_74_29 | 30682 | 31788 | + | GT4 |
| CAZyme | MGYG000001059_74 | MGYG000001059_74_30 | 31800 | 32747 | + | GT8 |
| CAZyme | MGYG000001059_74 | MGYG000001059_74_31 | 32778 | 33794 | - | GT2 |
| TC | MGYG000001059_74 | MGYG000001059_74_32 | 33781 | 35448 | - | 3.A.1.106.2 |
Gene ID: MGYG000001059_74_26
Type: CAZyme
Location: 27244 - 28245 (+)
Type: CAZyme
Location: 27244 - 28245 (+)
Gene ID: MGYG000001059_74_27
Type:
Location: 28260 - 29534 (+)
Type:
Location: 28260 - 29534 (+)
Gene ID: MGYG000001059_74_28
Type: CAZyme
Location: 29541 - 30689 (+)
Type: CAZyme
Location: 29541 - 30689 (+)
Gene ID: MGYG000001059_74_29
Type: CAZyme
Location: 30682 - 31788 (+)
Type: CAZyme
Location: 30682 - 31788 (+)
Gene ID: MGYG000001059_74_30
Type: CAZyme
Location: 31800 - 32747 (+)
Type: CAZyme
Location: 31800 - 32747 (+)
Gene ID: MGYG000001059_74_31
Type: CAZyme
Location: 32778 - 33794 (-)
Type: CAZyme
Location: 32778 - 33794 (-)
Gene ID: MGYG000001059_74_32
Type: TC
Location: 33781 - 35448 (-)
Type: TC
Location: 33781 - 35448 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A somerae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.