Cluster: MGYG000001059_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001059
- CGC Family ID: CGCFAM_05901
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001059_1 | MGYG000001059_1_17 | 15345 | 16757 | - | GH125 |
| pfam | MGYG000001059_1 | MGYG000001059_1_18 | 16759 | 18153 | - | PDZ | PDZ_2 | DUF4136 | PDZ_6 | PDZ_6 |
| TC | MGYG000001059_1 | MGYG000001059_1_19 | 18254 | 18781 | - | 2.A.51.1.6 |
| TC | MGYG000001059_1 | MGYG000001059_1_20 | 18778 | 19368 | - | 2.A.51.1.6 |
Gene ID: MGYG000001059_1_17
Type: CAZyme
Location: 15345 - 16757 (-)
Type: CAZyme
Location: 15345 - 16757 (-)
Gene ID: MGYG000001059_1_18
Type: pfam
Location: 16759 - 18153 (-)
Type: pfam
Location: 16759 - 18153 (-)
Gene ID: MGYG000001059_1_19
Type: TC
Location: 18254 - 18781 (-)
Type: TC
Location: 18254 - 18781 (-)
Gene ID: MGYG000001059_1_20
Type: TC
Location: 18778 - 19368 (-)
Type: TC
Location: 18778 - 19368 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A somerae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.