Cluster: MGYG000001056_CGC43
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate: alginate
- Genome ID: MGYG000001056
- CGC Family ID: CGCFAM_00331
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001056_208 | MGYG000001056_208_1 | 3 | 1907 | - | 1.A.33.1.2 |
| NULL(UNKNOWN) | MGYG000001056_208 | MGYG000001056_208_2 | 2096 | 3112 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | MGYG000001056_208 | MGYG000001056_208_3 | 3262 | 4257 | - | S09.UPB |
| CAZyme | MGYG000001056_208 | MGYG000001056_208_4 | 4313 | 5506 | - | PL38 |
| pfam | MGYG000001056_208 | MGYG000001056_208_5 | 5525 | 6280 | - | adh_short | KR | adh_short_C2 | SDR |
| TC | MGYG000001056_208 | MGYG000001056_208_6 | 6318 | 7781 | - | 2.A.1.14.25 |
| pfam | MGYG000001056_208 | MGYG000001056_208_7 | 7789 | 8130 | - | Cupin_2 |
| CAZyme | MGYG000001056_208 | MGYG000001056_208_8 | 8145 | 10343 | - | PL17 | PL17_2 |
| CAZyme | MGYG000001056_208 | MGYG000001056_208_9 | 10345 | 10893 | - | PL6 |
| CAZyme | MGYG000001056_208 | MGYG000001056_208_10 | 10968 | 12506 | - | PL6 |
| pfam | MGYG000001056_208 | MGYG000001056_208_11 | 12531 | 14198 | - | TIG | TIG |
| TC | MGYG000001056_208 | MGYG000001056_208_12 | 14223 | 15731 | - | 8.A.46.1.5 |
| TC | MGYG000001056_208 | MGYG000001056_208_13 | 15747 | 18899 | - | 1.B.14.6.1 |
Gene ID: MGYG000001056_208_1
Type: TC
Location: 3 - 1907 (-)
Type: TC
Location: 3 - 1907 (-)
Gene ID: MGYG000001056_208_2
Type:
Location: 2096 - 3112 (-)
Type:
Location: 2096 - 3112 (-)
Gene ID: MGYG000001056_208_3
Type: peptidase
Location: 3262 - 4257 (-)
Type: peptidase
Location: 3262 - 4257 (-)
Gene ID: MGYG000001056_208_4
Type: CAZyme
Location: 4313 - 5506 (-)
Type: CAZyme
Location: 4313 - 5506 (-)
Gene ID: MGYG000001056_208_5
Type: pfam
Location: 5525 - 6280 (-)
Type: pfam
Location: 5525 - 6280 (-)
Gene ID: MGYG000001056_208_6
Type: TC
Location: 6318 - 7781 (-)
Type: TC
Location: 6318 - 7781 (-)
Gene ID: MGYG000001056_208_7
Type: pfam
Location: 7789 - 8130 (-)
Type: pfam
Location: 7789 - 8130 (-)
Gene ID: MGYG000001056_208_8
Type: CAZyme
Location: 8145 - 10343 (-)
Type: CAZyme
Location: 8145 - 10343 (-)
Gene ID: MGYG000001056_208_9
Type: CAZyme
Location: 10345 - 10893 (-)
Type: CAZyme
Location: 10345 - 10893 (-)
Gene ID: MGYG000001056_208_10
Type: CAZyme
Location: 10968 - 12506 (-)
Type: CAZyme
Location: 10968 - 12506 (-)
Gene ID: MGYG000001056_208_11
Type: pfam
Location: 12531 - 14198 (-)
Type: pfam
Location: 12531 - 14198 (-)
Gene ID: MGYG000001056_208_12
Type: TC
Location: 14223 - 15731 (-)
Type: TC
Location: 14223 - 15731 (-)
Gene ID: MGYG000001056_208_13
Type: TC
Location: 15747 - 18899 (-)
Type: TC
Location: 15747 - 18899 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900556395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.