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Cluster: MGYG000001056_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001056_18 MGYG000001056_18_7 7925 9106 + 1.B.57.4.6
pfam MGYG000001056_18 MGYG000001056_18_8 9143 9622 + YgbB
NULL(UNKNOWN) MGYG000001056_18 MGYG000001056_18_9 9834 9944 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000001056_18 MGYG000001056_18_10 10076 11347 + GT4
CAZyme MGYG000001056_18 MGYG000001056_18_11 11344 12120 + GT2
CAZyme MGYG000001056_18 MGYG000001056_18_12 12478 13959 + GH140
TC MGYG000001056_18 MGYG000001056_18_13 14072 14992 + 2.A.4.7.2
Gene ID: MGYG000001056_18_7
Type: TC
Location: 7925 - 9106 (+)
Gene ID: MGYG000001056_18_8
Type: pfam
Location: 9143 - 9622 (+)
Gene ID: MGYG000001056_18_9
Type:
Location: 9834 - 9944 (-)
Gene ID: MGYG000001056_18_10
Type: CAZyme
Location: 10076 - 11347 (+)
Gene ID: MGYG000001056_18_11
Type: CAZyme
Location: 11344 - 12120 (+)
Gene ID: MGYG000001056_18_12
Type: CAZyme
Location: 12478 - 13959 (+)
Gene ID: MGYG000001056_18_13
Type: TC
Location: 14072 - 14992 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000001056_18_13 vegetarian > vegan 1.27064 0.00667

🧭 Explore Read Mapping of CGC

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