Cluster: MGYG000001056_CGC15
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000001056
- CGC Family ID: CGCFAM_01309
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001056_61 | MGYG000001056_61_18 | 22326 | 23093 | + | GT2 |
| NULL(UNKNOWN) | MGYG000001056_61 | MGYG000001056_61_19 | 23198 | 24184 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001056_61 | MGYG000001056_61_20 | 24253 | 25119 | + | GT2 |
| CAZyme | MGYG000001056_61 | MGYG000001056_61_21 | 25228 | 26028 | - | GT2 |
| CAZyme | MGYG000001056_61 | MGYG000001056_61_22 | 26043 | 26948 | - | GT32 |
| CAZyme | MGYG000001056_61 | MGYG000001056_61_23 | 26956 | 27774 | - | GT11 |
| pfam | MGYG000001056_61 | MGYG000001056_61_24 | 27808 | 28740 | - | Lip_A_acyltrans |
| TC | MGYG000001056_61 | MGYG000001056_61_25 | 28796 | 30658 | - | 3.A.1.106.2 |
Gene ID: MGYG000001056_61_18
Type: CAZyme
Location: 22326 - 23093 (+)
Type: CAZyme
Location: 22326 - 23093 (+)
Gene ID: MGYG000001056_61_19
Type:
Location: 23198 - 24184 (+)
Type:
Location: 23198 - 24184 (+)
Gene ID: MGYG000001056_61_20
Type: CAZyme
Location: 24253 - 25119 (+)
Type: CAZyme
Location: 24253 - 25119 (+)
Gene ID: MGYG000001056_61_21
Type: CAZyme
Location: 25228 - 26028 (-)
Type: CAZyme
Location: 25228 - 26028 (-)
Gene ID: MGYG000001056_61_22
Type: CAZyme
Location: 26043 - 26948 (-)
Type: CAZyme
Location: 26043 - 26948 (-)
Gene ID: MGYG000001056_61_23
Type: CAZyme
Location: 26956 - 27774 (-)
Type: CAZyme
Location: 26956 - 27774 (-)
Gene ID: MGYG000001056_61_24
Type: pfam
Location: 27808 - 28740 (-)
Type: pfam
Location: 27808 - 28740 (-)
Gene ID: MGYG000001056_61_25
Type: TC
Location: 28796 - 30658 (-)
Type: TC
Location: 28796 - 30658 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900556395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000001056_61_18 | vegetarian > omnivore | 3.31945 | 0.00174 |
| MGYG000001056_61_18 | vegetarian > vegan | 2.23276 | 0.00667 |
| MGYG000001056_61_21 | vegetarian > omnivore | 2.30214 | 0.00174 |
| MGYG000001056_61_21 | vegetarian > vegan | 1.60792 | 0.00667 |
| MGYG000001056_61_23 | vegetarian > omnivore | 2.41191 | 0.00174 |
| MGYG000001056_61_23 | vegetarian > vegan | 1.52872 | 0.00667 |
| MGYG000001056_61_24 | vegetarian > omnivore | 1.12358 | 0.00174 |
| MGYG000001056_61_24 | vegetarian > vegan | 1.63183 | 0.00667 |