Cluster: MGYG000001030_CGC8
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001030
- CGC Family ID: CGCFAM_00574
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001030_3 | MGYG000001030_3_69 | 77134 | 79611 | - | GH2 |
| CAZyme | MGYG000001030_3 | MGYG000001030_3_70 | 79687 | 82569 | - | GH31_4 |
| TF | MGYG000001030_3 | MGYG000001030_3_71 | 82819 | 86823 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000001030_3 | MGYG000001030_3_72 | 87233 | 88726 | + | 1.B.14.6.1 |
| NULL(UNKNOWN) | MGYG000001030_3 | MGYG000001030_3_73 | 88730 | 90400 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001030_3 | MGYG000001030_3_74 | 90477 | 92144 | + | 8.A.46.1.4 |
| NULL(UNKNOWN) | MGYG000001030_3 | MGYG000001030_3_75 | 92223 | 93998 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000001030_3 | MGYG000001030_3_76 | 94012 | 96138 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000001030_3 | MGYG000001030_3_77 | 96164 | 97894 | + | GH5_4 |
| pfam | MGYG000001030_3 | MGYG000001030_3_78 | 98087 | 99568 | + | FGGY_N | FGGY_C |
| pfam | MGYG000001030_3 | MGYG000001030_3_79 | 99590 | 100909 | + | AP_endonuc_2 |
| TC | MGYG000001030_3 | MGYG000001030_3_80 | 101014 | 102486 | + | 2.A.1.1.3 |
| TF | MGYG000001030_3 | MGYG000001030_3_81 | 102622 | 103596 | + | GerE |
| NULL(UNKNOWN) | MGYG000001030_3 | MGYG000001030_3_82 | 103707 | 105014 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001030_3 | MGYG000001030_3_83 | 105057 | 105788 | + | 9.B.20.1.4 |
Gene ID: MGYG000001030_3_69
Type: CAZyme
Location: 77134 - 79611 (-)
Type: CAZyme
Location: 77134 - 79611 (-)
Gene ID: MGYG000001030_3_70
Type: CAZyme
Location: 79687 - 82569 (-)
Type: CAZyme
Location: 79687 - 82569 (-)
Gene ID: MGYG000001030_3_71
Type: TF
Location: 82819 - 86823 (-)
Type: TF
Location: 82819 - 86823 (-)
Gene ID: MGYG000001030_3_72
Type: TC
Location: 87233 - 88726 (+)
Type: TC
Location: 87233 - 88726 (+)
Gene ID: MGYG000001030_3_73
Type:
Location: 88730 - 90400 (+)
Type:
Location: 88730 - 90400 (+)
Gene ID: MGYG000001030_3_74
Type: TC
Location: 90477 - 92144 (+)
Type: TC
Location: 90477 - 92144 (+)
Gene ID: MGYG000001030_3_75
Type:
Location: 92223 - 93998 (+)
Type:
Location: 92223 - 93998 (+)
Gene ID: MGYG000001030_3_76
Type:
Location: 94012 - 96138 (+)
Type:
Location: 94012 - 96138 (+)
Gene ID: MGYG000001030_3_77
Type: CAZyme
Location: 96164 - 97894 (+)
Type: CAZyme
Location: 96164 - 97894 (+)
Gene ID: MGYG000001030_3_78
Type: pfam
Location: 98087 - 99568 (+)
Type: pfam
Location: 98087 - 99568 (+)
Gene ID: MGYG000001030_3_79
Type: pfam
Location: 99590 - 100909 (+)
Type: pfam
Location: 99590 - 100909 (+)
Gene ID: MGYG000001030_3_80
Type: TC
Location: 101014 - 102486 (+)
Type: TC
Location: 101014 - 102486 (+)
Gene ID: MGYG000001030_3_81
Type: TF
Location: 102622 - 103596 (+)
Type: TF
Location: 102622 - 103596 (+)
Gene ID: MGYG000001030_3_82
Type:
Location: 103707 - 105014 (+)
Type:
Location: 103707 - 105014 (+)
Gene ID: MGYG000001030_3_83
Type: TC
Location: 105057 - 105788 (+)
Type: TC
Location: 105057 - 105788 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp902468245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.